Tigriopus californicus (tidepool copepod): 131878980
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Entry
131878980 CDS
T09700
Name
(RefSeq) F-box/WD repeat-containing protein 2-like
KO
K10261
F-box and WD-40 domain protein 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131878980
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131878980
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
F-box-like
WD40
WD40_WDHD1_1st
EIF3I
F-box
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR55
PRANC
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
131878980
NCBI-ProteinID:
XP_059081143
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Position
4:complement(9437757..9441671)
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AA seq
499 aa
AA seq
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MDPAEWLVATGTTFLDLSSEDRFRTLVYLLDQCSPQERWRWQRELTERLHRDLISWLPVE
IAVKILTYLDLPSLFSAAQVNRTWQSRADSHLEVWRQHGESTGVQTPAASESVQEWKDTL
RAGIRIRRELKLGRAFEAGSLGNPSQSAAQFIALDYDEGFLAAASFDSSAEHSRDWSSLV
LISSLKRQEVIHRFMLAEPQLRPTVVKLIMPMYLCVGFVDGTIHYWDIPDANSVRFIGHT
GAVFSLAGNLELNLLVSGSCDLTVRLWNLATGTSIRTIQTHDNWVVTVILWVPPLFSGDS
KRNDTLKKRLFTMTKTQIHCFEWTSEKDLPALQKPYLVIPLKQNEGYEELRGEFFTPGLH
YDPKASVISFVRQMLICETQTIGDADIISVCAETGVTKRSIHINQKIRKLLAVGNRFALI
LLPYVDSKYKNLGIIDLQSRKLIGGATVPHSRASTPDFSQIAVGHPGWLDGLSTEISTNQ
DLVIALRVNNGTIHTLKWH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgcggaatggttggtggccacgggtacgaccttcctggacttgagctcggag
gaccgtttccgcaccttggtttatctgttggatcagtgtagcccgcaggaacgatggcga
tggcaacgggaactgaccgaacggcttcatcgagatctgatcagttggctgcccgtggaa
attgccgtgaaaatcttgacctacctggatcttccaagtctcttcagtgctgctcaagtg
aaccgtacttggcaatcacgggctgacagtcacttggaggtctggcggcaacatggggaa
agcacgggggttcaaaccccggcagcttcagaatccgtacaagaatggaaagatactctc
cgagctggaatccgcatccgaagagagctcaaattgggacgggcgtttgaagctggatcc
ttggggaacccctcacaatctgcggctcaattcatcgccctcgactacgatgaaggtttc
ttggcggccgctagctttgattcttctgccgaacactcacgggattggtcatcattggtt
ttgataagttccctgaaacggcaagaagtgattcatcgtttcatgttggccgaacctcag
cttcgtccaacggttgtgaagcttataatgcccatgtacctttgtgtgggattcgtggat
ggaactatccattattgggacattccagacgccaattcagtgagatttatcggccacacc
ggtgcagtattctccttggccggaaacctggagctgaatttgttagtgtctggatcttgt
gatttgacggtccgattgtggaacctggccacgggcacatccattcgaaccattcaaacc
catgacaattgggtagtgaccgtgatattatgggttccgccattgttctcgggagattcg
aaacgaaacgacactctcaaaaagaggcttttcaccatgaccaagactcaaattcattgc
tttgagtggacgtcggagaaagatctgccagctcttcagaagccgtacctggtcatccca
ttgaaacaaaatgaaggctacgaggagcttcgaggcgagttcttcacccctggtcttcat
tacgatcctaaagcctcagtcatttccttcgtcagacaaatgttgatttgcgaaacgcaa
actataggtgatgcagatatcatctccgtgtgcgctgaaactggtgttaccaagcgcagt
attcatatcaaccaaaagatccgcaagcttctcgccgtgggtaatcggtttgctctgatt
ttattgccatacgtggacagtaaatataagaacttgggcatcattgatcttcaaagccga
aaactcattggaggagccacagttcctcattcacgggccagcactccggatttctcccag
attgcggttggtcatcctggttggttggatggtttatccacggaaatttcaaccaatcaa
gacttggtgatcgctttacgagtgaacaatggtaccatccacactttgaaatggcattaa
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