Tigriopus californicus (tidepool copepod): 131879374
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Entry
131879374 CDS
T09700
Name
(RefSeq) fringe glycosyltransferase-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00514
Other types of O-glycan biosynthesis
tcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
131879374
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
131879374
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131879374
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
131879374
Glycosyltransferases [BR:
tcf01003
]
Glycan extension
O-Glycan
131879374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Glyco_tranf_2_4
Adeno_E3A
Motif
Other DBs
NCBI-GeneID:
131879374
NCBI-ProteinID:
XP_059081661
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All DBs
Position
1:14971786..14975636
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AA seq
349 aa
AA seq
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MKKEPPTWSHLWTRYGSKSLVLQSVAVIAICVLLFCFLIIHKTTSDSSTSVHQHWNYRGN
ILEVTPNVARRFKISVPQTSAALAHLEDIFVSVKTSQKFHESRLDVILNTWFQLARDQIW
FFTDAEDPEINRRAYGHLKVTNCPASHSRQALCCKMAAEFEAFLQTSKSWFCHFDDDNYV
NIQALVSKLQEFDYREDWYLGKPSIPEPLKIPDRENMKDQLSFWFATGGAGFCLSRSLAL
KMRPVAGGGKFELVGDKIRLPDDVTMGYIAEHLLHTPLTVIEEFHSHLEPQRLIEKSLDS
QISFSYSKYGNEMNTLVIEGFNDEEDPTRFKSLHCKLFPNFSWCPSKSS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggagcctcccacatggagccatttatggacccgatatggttccaaatctctg
gtgcttcagagtgtggccgtgattgccatctgtgtccttttgttttgctttctgatcatt
cataaaacaacgagtgacagttcgacgtcagtacatcaacattggaactaccggggcaac
atcctggaggtcactcccaatgtggccagacggttcaagatctctgtgccacaaacttca
gcggctttggcccatttagaagacattttcgtgtcggtgaagactagtcagaaattccat
gagtccagattggatgtgatcctcaacacctggttccaattggcccgggatcaaatttgg
ttctttaccgacgctgaagatcccgaaatcaatcggcgagcttatggtcatctcaaagtt
accaattgtcctgcctctcatagtcggcaagccctttgttgcaaaatggccgcagaattc
gaagccttcttgcaaacatcaaagagctggttctgtcactttgatgatgacaattatgtg
aacattcaagctttggtgagcaaactccaagagtttgactacagggaggattggtacttg
ggtaagccatccattcccgaaccgctcaagatcccggaccgcgaaaatatgaaggaccag
ttgtcattctggtttgccacaggcggagctggattctgcctgagccgctctctggcactt
aaaatgcggccggtcgcgggaggcgggaagtttgaattggtcggtgacaagattcggtta
ccggatgatgtcaccatggggtacatcgccgaacacctcctccacaccccattgactgtg
attgaggaattccattcgcatttggagccccagagactcatagaaaagtctttggactct
cagatctcgttttcttactccaagtacggcaatgaaatgaacacattggtcattgaaggc
tttaatgacgaggaagatccaaccagattcaagagtcttcactgcaagttgtttccgaac
ttcagttggtgcccgtccaagtcgtcttga
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