Tigriopus californicus (tidepool copepod): 131879665
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Entry
131879665 CDS
T09700
Name
(RefSeq) actin-5-like
KO
K05692
actin beta/gamma 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03082
ATP-dependent chromatin remodeling
tcf04145
Phagosome
tcf04814
Motor proteins
tcf04820
Cytoskeleton in muscle cells
tcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131879665
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131879665
09142 Cell motility
04814 Motor proteins
131879665
04820 Cytoskeleton in muscle cells
131879665
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131879665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131879665
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131879665
03036 Chromosome and associated proteins [BR:
tcf03036
]
131879665
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131879665
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131879665
04147 Exosome [BR:
tcf04147
]
131879665
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131879665
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
131879665
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
131879665
NuA4 complex
131879665
Chromatin remodeling factors
BAF complex
131879665
PBAF complex
131879665
GBAF(ncBAF) complex
131879665
SWR1 complex
131879665
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
131879665
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
131879665
Exosome [BR:
tcf04147
]
Exosomal proteins
Proteins found in most exosomes
131879665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
131879665
NCBI-ProteinID:
XP_059082021
LinkDB
All DBs
Position
1:complement(11526323..11530299)
Genome browser
AA seq
439 aa
AA seq
DB search
MDKLSVSSHSKTMKDMSIPNSLVLDLGTANTKVGWAGHGEPSSVFPTVVGRGRHKGAMKN
LGLKDSYVGRHAQNLRGILSLNQPIRQGVVENWDDLETLWDYVWDKEVNFGGAKNDNDAG
EYHVLVSVPPLCPPEDWRKMGEILLEGAGVSGIYLANKSVLSMYGGGRTTGVCVDTGEDM
TYIVPCWEGSPLPDATLILKLGGKHITDRLLSLLAQGKYSFPDDTFLIWKRAGKTTNRLC
IASRRDVVREAKEKYCRFYDQTFPSNGLKEVEEEVLRLPDGNIVVVGDEAYSAPELMFQP
ELIKKKYSSLHELVYESVMRCDEKLRPRLLSNIMLTGGNSLMPGLDMRLQKELSKMLPKS
TIVRVQAQKGRENFTWNGGAHLCSLSSFQRLWLTKQDYMENGVHASRSTLNVAENGIPEN
GIPENGIPESQEPIVAELP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattgtcagtgagcagccacagtaagaccatgaaagacatgagcattccaaac
agccttgtgttggacttgggcacagccaacactaaggtcggatgggctggtcatggtgag
ccctcgtccgtttttccaaccgtggttggtcggggccgccacaaaggggctatgaagaac
ctaggcctcaaggacagttacgtcggaagacatgcgcaaaatctcagaggcatcctcagt
ctcaaccaacccataaggcaaggcgtggttgagaattgggacgatctcgagaccctatgg
gactacgtctgggataaggaggtcaacttcggaggtgctaagaatgacaacgatgctggc
gagtaccatgttctcgtatccgtcccacccctgtgtccccccgaggattggcgcaagatg
ggtgaaatccttctggagggcgctggtgtgagtggtatttacttggcaaacaagtcagtc
ctctccatgtatggtggaggtcgtaccacgggtgtttgcgttgacacaggcgaggacatg
acctacatcgttccgtgttgggagggctctccgctcccggatgcaacccttattctgaaa
ttgggaggaaagcacatcacggatcgacttctatccctcctggcacaaggcaaatacagc
ttccccgacgacacgtttctcatttggaagagggcgggaaagaccaccaaccgcttgtgt
atagccagtcgccgggatgtggtgagggaggccaaagagaagtattgcagattctacgac
cagaccttcccctccaacggcctcaaggaagtagaagaagaggtcctccgattgcctgat
ggcaacattgtggtggtcggcgatgaggcttattccgcacctgagctcatgttccagcca
gagctgatcaagaagaaatactccagtctccacgaactggtctacgagagtgtcatgcgc
tgtgacgagaaactacggcctcgtttgctctccaatatcatgctcaccggaggcaactcc
ctcatgcccggtctggatatgaggctccagaaggagctgtccaaaatgctacccaagtcc
acgattgtgcgtgtccaagcacaaaagggtcgggaaaacttcacctggaatggaggggcg
catctctgctccttgagctcgtttcagcgactgtggttgaccaaacaggattacatggaa
aacggcgtccatgcctcgagatccactttgaatgtggccgagaatgggatccctgagaat
gggatccctgagaatgggatccccgagtcccaagagcccatcgtggctgagcttccgtga
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