Tigriopus californicus (tidepool copepod): 131880014
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Entry
131880014 CDS
T09700
Name
(RefSeq) serine-rich adhesin for platelets-like
KO
K23404
transmembrane anterior posterior transformation protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131880014
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
131880014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF747
New_glue
Motif
Other DBs
NCBI-GeneID:
131880014
NCBI-ProteinID:
XP_059082493
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All DBs
Position
5:3952246..3976465
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AA seq
1083 aa
AA seq
DB search
MVQPSSIGGSPTRKVQTSFFHYISSEVTRGYELEHDEARYTARRQKMYTFMRIPRELEKF
MSYGFFQCLDSFLFVFTFLPLRFVLACLALLWRVPLVWLGALRPYHGRSLFPAEIIDLLK
GLIIAVCVYSMTHIDTSVMYHMIKSQSVIKLYLFYNMLEVGDRLFSAFGQDTIDALFWTA
TEPRNRKRETIGVIPHFLLTVTYVFLHTLLILLQATTLNVALNASNKALLAIMMSNNFVE
LKASVFKKFDKNNLFQVSCSDVRERFHLFALLFVVVVQTMKEYGWREESFWSMAPDCLTV
LMAEFIVDWLKHAFITRFNEVSAEVYKDYTISLAYDLAQTKQKHALSDHSDLVSRRMGFM
PLPLGVVMIRVIWTSIRFNGWGAGIVFVLAYLCLLTFRILGSIVILGKACDLIDQHQAKQ
KETPLPSATTTTTTTSASASSSSTATSASTHPSSKQQAQKATSEHHHPLAANNDKAARRK
DSGISVTPFAPVMPQSQVDQLAQNVLQTNGREGNQSDKDTGEASLVSSVLVPKVHDTNIG
VNTLKAKKNDSSGEPQRARDGKITLASTPLGPPSCSSSLSSSSSSSSISSSSVLANKDSK
LNKAGPFSAAGVARDHENPKITTPHKTHDDGMLDERVDNAQIWSQGSQSGTLTPTTLSES
RFSGGLSGSHLLPDLLTSTSQGTTVPTSAVTQGRRETALLMQKATLTRVSDQEGSTLQPS
NSSCGSGANSVVQTLSAAEGLQHGQLKENNHKGEQRGHLPQSIEKKNNDNGDTKLGLMQT
SVDTQSGDGTSSRCCPGLSRVEVVSNGNSQATWSGSHTNTISEKQLSEIGWGDSGVVQAK
GHCVDGNGNPNAKLKPISGPNSVSDESTFMSTEKCSHKVDGPHQGETTSAMPCGVETCWS
YGRNAPDSFRQHSNHRVRTSTVCTTGDIDLPHSSIVSFSSNEEASEGSCCSPGGTKGCAS
STSNSSPLRLRSLSSPDFMKNDRVFDAERDWPVVIDSGDETEHVGDAEDHMMLQEAHEVH
TQTASLLSAVATLVQSASNRGSRHNSSDDCPALRQRLSSGETSASIIQLDMERSSSDGKG
NPA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaccatcctccattggaggttctcctaccagaaaggtccaaacctcgtttttc
cactatatctcgagtgaggtgacacgggggtatgagttggagcacgatgaggctcgctac
acggctcgtcgccagaagatgtacacgtttatgcggattccgcgagaactggagaagttc
atgtcgtacgggttcttccagtgcttggattccttcctctttgtgttcaccttcttgccc
ttacgattcgtcttggcctgtttggccttgctatggcgggtccccttggtttggctgggt
gctttgaggccgtatcatggtcggagtttgttcccagctgaaatcattgatctcctcaag
ggcctcatcatcgcggtctgtgtctattccatgacgcacattgacacgtcggtgatgtat
catatgatcaaaagccaatctgtgatcaagctatatctgttctataatatgctagaggtt
ggagaccgcctcttttccgcttttgggcaggacacgatcgacgccttgttttggacagcc
acggaacctcggaataggaaacgagagaccatcggagtgattccccatttccttctcacc
gtcacttacgtgtttctacacactctattgatcttacttcaagcaaccaccttgaacgtg
gctttgaatgcttccaacaaggctctgctggcgatcatgatgtccaataattttgtggaa
ctcaaggcgagtgtgtttaagaaattcgacaaaaataacttgttccaagtttcttgctcg
gatgtcagggagaggttccatctcttcgctctcttatttgtcgtggtggttcaaacgatg
aaggagtacggatggcgagaagaaagtttttggtccatggccccagattgtttgactgtt
ctcatggctgagttcatcgttgattggctcaaacatgcttttataactcgcttcaacgaa
gtgtcagccgaggtctacaaggattataccatatctttggcttacgaccttgcccaaacg
aagcaaaagcacgctctgtcggaccattcggatctggtgtcgaggcgaatgggtttcatg
ccccttccactaggcgtggtcatgatccgtgtgatttggacctcaatccgcttcaatggt
tggggtgctggaattgtgttcgtcctggcctatttatgtttgcttacattcagaatcctg
ggctccatcgtaattttgggaaaagcctgtgatctaatcgaccaacatcaagccaagcaa
aaagagactcccctaccatcagccaccaccaccaccaccacgacctcagcctcagcctca
tcgtcgtccacggcgacttcagcctccacccacccatcatcgaagcagcaggcacaaaaa
gctacgagcgagcatcatcatcctctggcggcaaataatgacaaagcggcaagaaggaag
gactcggggatttcggtgactccatttgctccagtgatgcctcagtctcaagtggatcag
ttggctcagaatgtacttcaaaccaatggaagggaaggtaatcagtctgataaggacact
ggagaagcctccctcgtgtcatcagtcttggtcccgaaggtgcacgacacgaatattgga
gtcaacacacttaaagcgaaaaagaatgactcctccggggaaccccaaagagccagagat
ggaaaaataaccttggcttccactccattgggtcctccatcttgctcgtcttcattatcg
tcttcctcctcgtcctcgtccatttcgtcgtcgtcagtcctggcaaataaagattccaaa
ttgaataaggcaggaccattctctgcggccggtgtggcgagagatcatgaaaaccccaaa
ataacaactccacacaagacccatgacgatggaatgcttgatgagcgggtggataatgca
cagatctggagccagggttctcaaagtggtactctcactccgaccaccttgtctgaaagc
aggttctcgggtggattgtctggtagccacttgttaccagatctcctcacatcaacatcc
caaggaacaaccgtcccaacttcagccgtcacccagggaagacgagagaccgcgttgttg
atgcaaaaggccacattaacaagagtttctgatcaagagggatcgactctgcagccctca
aacagtagctgtggtagtggtgccaatagtgttgttcagacgcttagtgctgccgagggg
ctccaacacggccagttgaaagaaaataaccacaagggagaacagagaggccatctgcca
caatcgattgagaagaagaacaatgacaatggggacacgaaattgggcctgatgcagaca
tctgttgatacccagtcgggtgatggaacatcatcaagatgttgtcctggcctgtcgagg
gtcgaggtcgttagcaatgggaacagtcaagccacatggagcggcagccacactaacacc
atcagtgagaagcaattgtcagaaattggttggggggactcgggggtcgtccaagccaaa
ggtcattgtgtggatggaaatggcaatccaaatgccaaattgaaacccattagcggccca
aactctgtgagtgatgagagtacattcatgtcgacagagaaatgctcccataaagttgat
ggtccccatcagggcgaaacgacttctgccatgccttgtggcgtggaaacgtgctggagc
tatggccgtaatgcccctgattctttccgacagcattccaatcaccgggttcgtacctca
accgtctgcaccacaggagacattgatctcccgcactcctccattgtttccttctcgtcc
aatgaggaagcctcggaagggtcatgctgctcacccggagggaccaaaggctgtgcatcc
tccacctccaattcgtcgcctcttcgcttacgatccctctcatcacctgattttatgaag
aatgaccgtgtttttgacgccgagagggattggcccgtggtcatagatagtggggatgag
accgaacacgtgggagacgcggaggatcatatgatgctccaagaagcacacgaggttcac
acacaaactgcgtcattgctttcggccgtggccactttggttcagtcggcgagcaatcgg
gggagtcgacacaattcgtccgatgattgtcctgccttgcggcaacgtctgtcctcgggt
gagacttctgcttcaataatccaactggatatggagagatccagttcagatggaaaggga
aaccctgcctag
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