Tigriopus californicus (tidepool copepod): 131880364
Help
Entry
131880364 CDS
T09700
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00600
Sphingolipid metabolism
tcf01100
Metabolic pathways
tcf04148
Efferocytosis
Module
tcf_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131880364
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131880364
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
131880364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
131880364
NCBI-ProteinID:
XP_059082956
LinkDB
All DBs
Position
5:12945163..12946965
Genome browser
AA seq
452 aa
AA seq
DB search
MSFLLQEEFVVKFNRKSRPYTATLTTRGVTFKPLDILKGRIIHIPKTFLISCQSNLASEE
ENGLFQLIAFDPETFKIKTYNVHSLPSLTEPEAVSLIWIQAFQRCFPLSDLPDNKNILAL
VNPKAGQGMAKKMSEKICPIFQSVGFQLNIVQTRHANHGKDIVINADLTKFGTILIFSGD
GLVHEVMNGIYEREDTKDIFQRVNIVPFPVGSGNGLNRSLVHFSGYRFDGRGINFALFNV
LRGRPTSIDSFLVQQENLEDRIGFLSLTYGIIADIDIESEGLRSLGALRFTVWAMHRISS
RKNYQVKISYLKAKGHQANQYDLPPLEEDLPDSWDHEQDEFTAVNIVNMPYIGEREWIAP
SCDPNDGLLWMLIIRKEAKKTDLCKIFIEVETGKHVKIEGVDMFPIIGFRLEPTNDNGCL
SLDGEVLETRAVQGIVRPKSWKTLTRLNAIKK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcttcttcaagaggaattcgtggtcaaattcaacaggaagagtcgaccctac
acggctactttgaccactcgaggagttacttttaaaccgcttgacattctaaagggcagg
ataattcatattcccaagacatttttgatttcttgtcaatccaatctggctagtgaagaa
gaaaatgggttgttccaactgattgcatttgatcccgagacgttcaaaattaagacctac
aatgttcattctttgccaagcctaacggaacccgaggcagtgtcgctgatatggatacaa
gcgtttcaacgatgcttccctttatctgatctacctgacaacaagaatattctggcatta
gtcaaccccaaggctggccagggcatggccaagaaaatgagtgagaaaatatgcccgata
tttcagagtgtcggcttccaattgaatattgttcaaactaggcacgcgaatcacggcaaa
gatatcgtcatcaacgcagacttgaccaaatttggaacgatcctgatcttttctggggat
ggactcgttcacgaagttatgaacggaatttatgaacgagaagatactaaagatatattc
caaagggtgaacattgttcctttccctgttggatctgggaacggattgaaccggtcattg
gttcatttctccggataccggttcgatgggaggggaatcaattttgctttgttcaacgtc
cttcgaggacgcccaacaagtattgactcatttttggttcagcaggagaaccttgaagat
cggataggatttttgtcgctaacttatgggataattgctgatattgacattgaaagtgag
ggactacggtcccttggagcactccgtttcacggtttgggcaatgcatcgaattagctcg
aggaagaactaccaagtgaagatatcttatctgaaagcaaagggtcatcaagccaaccag
tatgatttgccgcctttggaagaagatcttccagattcatgggatcacgaacaagatgaa
ttcactgcagtcaatatcgttaatatgccttatattggagagagagaatggattgctcct
tcgtgtgatcccaatgatggtcttctgtggatgttaattattcgaaaagaggccaagaaa
acagatctttgcaagatattcatcgaagtcgaaaccggcaaacatgtcaagattgaggga
gtggatatgttcccgataattgggtttcgattggagccaaccaatgataatggatgtctt
agcctggatggtgaagttttggaaacaagagctgtacaaggcattgtcagacctaaatcc
tggaagactttaactcgattgaatgcaatcaagaagtga
DBGET
integrated database retrieval system
