Tigriopus californicus (tidepool copepod): 131881004
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Entry
131881004 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase TM129-like
KO
K22380
E3 ubiquitin-protein ligase TM129 [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131881004
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131881004
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131881004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tmpp129
Motif
Other DBs
NCBI-GeneID:
131881004
NCBI-ProteinID:
XP_059083733
LinkDB
All DBs
Position
5:complement(12135209..12139896)
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AA seq
378 aa
AA seq
DB search
MMGETSWMFCLFYIVFATGFLFQFQDFQNLGLSPENLLTNVFQLDLGSEQLQFLEFHLRK
SCGALLLQTFLPIGFLVGFSYFHVHVDQQYPSIYAFWESNLPFQVSLALFLGLWLLVWVV
AQYWTLNHFEHHPYVTKLKLYAQNGDWKSVMSDINTEFRRIDKFTICTNPIERVVVTDNW
VIYLGAVPWKFHLAHQSDVTLSLIQSEHHNISTEGQTGGTQFLRIQVQNGKPNCESFSFR
LNSVEYQNLQDKLTRQIQNIQNIQIFKTVSDRFVEVFKEAVAQNPKAPAEEELEACIGCM
ATEANVKLIRRCDTIDQENENTSCVNCYCRPMWCLNCLGKWFASRQNQQQPETWLGSKCP
CPTCRSKFCVLDVALIES
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaaacgagttggatgttttgcttgttttatatcgtgttcgccaccgggttc
ttgttccagttccaagatttccaaaacttgggcctgagtcccgagaatctgttgaccaac
gtgttccaattggatttgggcagcgagcaattgcaattcctcgaatttcaccttcgaaaa
tcgtgtggagcccttttgttgcagacctttctgcctattggtttcttggtggggttcagc
tacttccacgtccacgtggatcaacaatatccttccatctatgcgttttgggagagcaac
ctgccatttcaagtcagcctcgccctgttccttggactgtggttgcttgtctgggttgtg
gctcaatattggaccctcaaccatttcgagcaccacccttacgttacaaaattgaaactc
tacgcacaaaatggggactggaaatctgtcatgagcgacatcaacactgagtttagaagg
attgacaaattcacgatttgcactaatcccattgaaagagttgtcgtcacggacaactgg
gtcatctatttgggcgctgttccctggaagttccatctcgcccatcaatccgatgtgacg
ctcagtctgattcagagtgagcatcataatatttccaccgaaggacaaactggaggcacg
caatttctccgaattcaggtccaaaacggcaaacccaattgcgagtcgttctccttcagg
ttgaactcggtcgagtatcagaatctgcaagataagttgacccgacagatccaaaacatc
caaaacattcaaatttttaaaaccgtcagcgatcggtttgtcgaggtgttcaaagaagca
gtggctcaaaatcctaaggctcctgctgaagaggaattggaggcgtgcattgggtgtatg
gctaccgaggctaatgtcaagttgattcggcggtgtgacaccatcgatcaagagaatgag
aacacctcttgcgtcaattgttactgcagaccaatgtggtgcctcaattgtctaggcaaa
tggtttgcatcgaggcaaaatcagcaacaaccggaaacatggctcggttcaaaatgtcct
tgtccaacttgccgatccaagttttgtgtcttggatgtggccttaattgaatcttga
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