Tigriopus californicus (tidepool copepod): 131884137
Help
Entry
131884137 CDS
T09700
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00260
Glycine, serine and threonine metabolism
tcf00270
Cysteine and methionine metabolism
tcf00670
One carbon pool by folate
tcf01100
Metabolic pathways
tcf01230
Biosynthesis of amino acids
Module
tcf_M00035
Methionine degradation
tcf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
131884137
00270 Cysteine and methionine metabolism
131884137
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
131884137
Enzymes [BR:
tcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
131884137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Herpes_UL46
Motif
Other DBs
NCBI-GeneID:
131884137
NCBI-ProteinID:
XP_059087787
LinkDB
All DBs
Position
7:complement(8958882..8962547)
Genome browser
AA seq
649 aa
AA seq
DB search
MTGEDASALEPAFQRKSQYGFSSCAHYLTASQLFGQVRGHLFRFRVIAPNSLAFVSLVES
PLHSVTNYALPHPNSKNHHKDPVHHHPTTTQSTAIPRPTIVSGGIAGKTTLQAYGKKSVG
SKMTSHECPADFIRPDLPSRCTWAIGKPISESPHSRDCPKKPIKIMPNVLYNVGNTPLIK
VNKIAESEGIKCELLAKCEFFNAGGSVKDRIGLRMVEDAEKAGVIKPGYTIIEPTSGNTG
IGLAMAAAVKGYRCIIVLPEKMSTEKVDTLRALGAEIVRTPTSATFDSPESHISVAQRLC
NEIPNAVILDQYRNPGNPLAHYDTTAEEILDQCDGKVDMLIVGAGTGGTATGIGRKMKEK
CPSCKIVIVDPEGSILAEPESLNKTDVTYYDVEGTGYDFIPTVLDRSVADKWRKSNDKDT
FRMARRLIREEGLLCGGSSGAAMAIAVDEAKSLKAGQKCVVVLPDSVRNYMTKFLNDNWL
AERDIIQLKEDEKLWWSNLKVSSLELSAPLSIRPTLKVEDTIKIMNKEGYDQLPVIDDKG
KICGVATLGSLKTKLLRGKVERFDPVEKAIYTTFKKVTLDTSLEKLDRILDKEHFALVVH
SQRLYTSDEDVETREVIVGIVTDIDLLHHVTKKEDFAGSSRSQSEGDDL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgactggtgaggatgcctcggcactggagcctgctttccaaagaaagtcccagtacgga
ttcagctcttgtgcacattacttgacagcctctcagcttttcggccaagttcgaggacac
ctgtttcgattcagagtcattgctccaaattccttagcatttgttagcttggtagagtcc
cctcttcattccgtcacaaattacgctttacctcacccaaactccaagaaccatcacaag
gacccagttcatcatcatccaactaccacccagagtactgcaatacctagaccaacgatt
gttagtggtggaattgccgggaaaactacgttgcaggcgtacgggaagaagagtgttgga
tccaagatgacgtctcacgaatgtcccgcggatttcattcgacctgacctgcctagccgt
tgtacttgggctattgggaagccaatctctgagagcccgcattcacgtgattgcccgaaa
aagcctatcaaaatcatgcccaatgtgttgtacaatgtgggcaatactccactcatcaag
gtgaataagattgcagaatctgagggcatcaaatgtgaactgttggccaaatgtgagttc
tttaatgcgggtggaagtgtgaaggatcgaattggcttgcgaatggtggaggatgccgaa
aaagccggagtgatcaaacccggatacaccatcattgagccaacctccggaaacactggc
attggtttggccatggctgccgcagtcaaaggttatcgttgcattattgtcctcccggag
aagatgagcacggaaaaggtggatactttacgtgcattaggagcggagatagttagaact
ccaacctcagctacctttgactcacctgagagtcatatttccgtggcccaacggctctgc
aatgagatccccaatgccgtcattttggatcaatatcgaaatccgggcaatccactggcg
cactatgataccactgccgaagagattctcgaccaatgtgatggaaaggttgacatgctc
attgtgggggctggaactggcggaacagccacgggcattggtcggaaaatgaaggagaaa
tgcccaagttgtaagattgtgattgtggaccccgagggatccatcctggctgagcctgag
tcactcaataagactgatgtgacctattatgacgtggaagggacgggatacgatttcata
cccaccgttctggatcgttccgtcgccgataagtggagaaagtccaacgacaaggatacg
tttcgaatggccagacgtctcattagagaagaaggcttactctgcggaggaagttcgggt
gcagccatggccatcgcggtggacgaagccaaatcgttaaaagcgggtcaaaaatgtgtg
gtggttttacccgattctgttcggaactacatgaccaagtttttgaatgataattggttg
gctgagcgcgacatcattcagctgaaggaggatgaaaagctttggtggtcgaatttgaag
gtctcttcattggagctgagtgcccctctgagtatccgacctacgctaaaggtcgaggac
actatcaagatcatgaataaagagggctatgaccagctgcctgtgattgacgacaaaggg
aaaatttgtggagtggctactttgggaagtttgaaaacgaaacttctccgaggaaaggtg
gaacgatttgacccagtggaaaaggccatttacacgactttcaagaaggtgactctggat
accagcttggagaaattggatcgcatcttggataaagaacactttgccctcgtggttcat
tctcaacgtctctatacttcggatgaagatgtggaaactcgagaggtgattgtgggcatc
gtcacggatatcgatttgctccatcacgtaaccaagaaagaagatttcgctggtagtagc
cgaagtcaaagcgagggagacgatttgtga
DBGET
integrated database retrieval system
