Tigriopus californicus (tidepool copepod): 131884242
Help
Entry
131884242 CDS
T09700
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00062
Fatty acid elongation
tcf01040
Biosynthesis of unsaturated fatty acids
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
Module
tcf_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
131884242
01040 Biosynthesis of unsaturated fatty acids
131884242
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131884242
Enzymes [BR:
tcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
131884242
Lipid biosynthesis proteins [BR:
tcf01004
]
Fatty acid synthase
Component type
131884242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTPLA
CS
Motif
Other DBs
NCBI-GeneID:
131884242
NCBI-ProteinID:
XP_059087941
LinkDB
All DBs
Position
7:complement(5174460..5175974)
Genome browser
AA seq
384 aa
AA seq
DB search
MSPSPFVYWAQNESHIFLRVDLKHVQKHQLNIAEEEIEFTGYGIGAQGSSEVEYHFLIEF
FLPVNREESTYLIKDREITIHIQKKEPDWWPRLLYTQQKLSWLKIDFDRWTSREEEEDDT
ETEEPGMSTQDLIKNRYPEVYEKLQKEELGFISESRRKIYLFCYNLFMLCGFVYVFLIMN
LRYARHGDEFIPETYKSVGNVMKMLHLFMILEVMHPMFGYTKGSIYEAFLQVFGRNFVLF
ALIEAEPRMQEKPAVFYLFMVYTTIEIVRYPYYMLRVYDLEFGILTWLRYTAWIPLYPAG
FVCEGVIILRNIPYFEETEKFSVALPNAWNIAFHFPTVLRIYLLLFFFPMLYTMMNHMYH
LRCKKLKIRQHVKNRRKKDDDFEE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgagtccttttgtgtactgggctcaaaatgagagccacatcttcctccgggtg
gatctcaaacatgtgcaaaagcatcaactcaatatcgccgaggaggagattgaattcacc
ggctacggcatcggggctcagggctcgtccgaggttgaatatcacttcttgatcgagttc
tttctcccggtcaatcgcgaggagtccacctatttgatcaaagaccgggaaatcaccatc
catatccagaagaaggaaccggattggtggccccgccttttgtacacacagcagaaactc
tcttggctcaagattgactttgatcgttggacatcgcgagaagaggaagaagacgataca
gagacggaagagcctgggatgtccactcaagatcttattaagaatcgatatcctgaggtc
tatgagaagttgcagaaggaagagttgggattcatctcggagtccagacgcaagatctac
ttgttttgctacaacttgttcatgctctgcggatttgtgtacgtgtttctgatcatgaac
ttgcgatatgcccgtcatggcgacgagttcattcccgagacgtacaaatccgtgggtaat
gtgatgaagatgctccatcttttcatgattctggaggtgatgcacccgatgttcggttac
accaaagggtccatctacgaggctttcctgcaggttttcgggcgcaattttgtcctcttc
gccctaatagaggctgaaccgagaatgcaagaaaagccggccgtcttttatctattcatg
gtgtataccacgattgagatcgttcggtacccttattacatgcttcgtgtgtacgatttg
gaatttggcatcctcacgtggctccgttacacggcctggatccctctctatccggctggg
ttcgtttgcgaaggcgtcatcattcttcgcaatatcccttactttgaagagaccgaaaag
ttctcggtggcattacccaatgcctggaatattgcctttcatttccccaccgttctccgt
atctatttgctcctgttcttcttccctatgctctacaccatgatgaaccacatgtaccac
ctccgatgtaagaaactcaaaattcgccaacacgtcaagaatcgtcggaaaaaggacgac
gatttcgaggagtga
DBGET
integrated database retrieval system
