Tigriopus californicus (tidepool copepod): 131884663
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Entry
131884663 CDS
T09700
Name
(RefSeq) CAD protein-like
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00220
Arginine biosynthesis
tcf00240
Pyrimidine metabolism
tcf00250
Alanine, aspartate and glutamate metabolism
tcf01100
Metabolic pathways
tcf01240
Biosynthesis of cofactors
Module
tcf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
131884663
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
131884663
00220 Arginine biosynthesis
131884663
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131884663
Enzymes [BR:
tcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
131884663
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
131884663
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
131884663
Peptidases and inhibitors [BR:
tcf01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
131884663
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
131884663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
MGS
ATPgrasp_Ter
Amidohydro_1
Peptidase_C26
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-GeneID:
131884663
NCBI-ProteinID:
XP_059088486
LinkDB
All DBs
Position
8:complement(10685101..10694446)
Genome browser
AA seq
2215 aa
AA seq
DB search
MDRYRRSNSVPSEEPKGTKAFLHLQDGSIVEGVSFGAERSVGGEVVFQTGMVGYTESLTD
PSYCAQILILTYPLVGNYGIPAECLNEETNLLEWFESRTIWANGLIVDELCETPSHWNHR
QSLSEWLLEQNIPAIRGVDTRALTQKIREHGTMLGKIVVGDEDVNQVPDVDPGKINLVAE
VSLKNKQVINPKGSPTICVVDCGLKYNQVRCLVKRGARVEIVPWDHPLDESEYDGLFLSN
GPGDPQVCAKTVKNIQNILKSSGKVKPIFGICLGHQLLSVAVGCQTKKMKYGNRGHNQPC
VHLTSKRCFMTAQNHGYDVDASTIPRHWSALFTNANDGSNEGLVSDDLPVFSVQFHPEHT
AGPEDLECLFDAFFDLIRHPDTKAAVAVADQIKKINPSFAALDPEQNSTKPRKVLILGSG
GLSIGQAGEFDYSGSQAIKALKEENVSTILINPNVATVQTSKGLADKVYFLPITTEYVEQ
VIESERPDGVLLTFGGQTALNCGVELDRMGIFSKYNVKILGTPIKSIVDSEDRKLFAERI
AEIGEKVAPSCIVSTVDEALQSAHQLGYPVLARAAYALGGLGSGFANNDRELQKLTKTAF
AHSSQVIIDKSLKGWKEVEYEVVRDAYDNCITVCNMENLDPLGIHTGESIVVAPSQTLTN
REYNMLRTTAINIIRHLGVVGECNVQYALNPKSEQYFIIEVNARLSRSSALASKATGYPL
AYIAAKLALGRSLSDLKNTVTGCTTACFEPSLDYCVVKIPRWDMSKFSRVSTKIGSSMKS
VGEVMAIGRKFEEAIQKALRMVDESVQGFDPYAKPVCEEELREPTDKRMFVLASAMKAGY
SIDKLYELTKIDHWFLSKLRNIIDWYEILEKKHVGNITGNILNGAKQLGFSDKQIAAVME
SSEMVIRSRRREFGITPWIKQIDTVAAEWPASTNYLYLTYNGSCHDVEFSTQPHTMVIGS
GVYRIGSSVEFDWCAVGCIRELRRLGKKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVM
DIYQLEHPEGVILSVGGQLPNNIAMSLYRQKVNVLGTSPESIDNAENRYKFSRLLDTIEI
KQPRWKELKDFHSARDFCQQVGFPCLVRPSYVLSGAAMNVAHNVQDLETYLNEATAVRLS
KEHPVVISKFITDAKEIDVDAVARKGEIICMAVSEHVENAGVHSGDATLVTPPGDINDET
LQKIKDITYKIAQALFVSGPFNMQLIAKDNELKVIECNLRVSRSFPFVSKTLGYDFIATA
TNVIVGNNPEPIDVLHGIGKVGVKVPQFSFSRLAGADVTLGVEMSSTGEVACFGEDRFEA
YLKAMMSTGFKIPQSNILLSVGSYKHKVEILPSIRLLHELDYKLYGSLGTSDYFREHGIP
VEPIEWMYENLGDDIKINSMAGQMVSMADYLSNKHFDMVINLPMRTCGAGRVSSFIPTYG
YRTRRMAIDYSVPLITDVKCAKLLIESIGKLKKQSPKLKTHIDCISSSRIVRLPGLIDPH
VHLRDPGATHKEDFATGTAAALAGGVTMMLVMPNTNPSIVDAETLTMAKGIARQKAYCDY
ALNVGASAGNAKLIAPLAKQVGALKMYLNETFTTLRLDNMTDWMTHFEHWPLTSPICVHA
EGRSTAAAILLASLYDRPLHICHVARKDEIEIIKAAKLKGLAITCEVCPHHLFLTEEHAK
AMGNAGQVRPNLVTKEDQNALWENLEFIDCFATDHAPHTLEEKNSEQSPPGFPGLETILP
LMLTAVNLGRMTLNDLKQKMHDNAKRIFNLPTQSDTYIEVNMDEAWTIPEETTFSKAKWT
PFAGMPVIGRLKRVVLRGKLAFVDGQVLIDPGFGEDVRTWKQKLTTLTALAKDPVGPRSN
SSLTNTSIKNANMAPIVETKPSPRPSPQTLQKKLSIPVGIPMIRTHHDLQNRHVLESTMF
DKDTLYSIFNLAETFRSCVALDQSIDHILKGKVMASMFYEASTRTSLSFSAAMQRLGGRV
IQMDVSTSSVKKGESLEDSVQVMAGYSDVVVIRHPEPGAVDRAAKVCLKPVINAGDGVGE
HPTQALLDVFTIRSEIGTVKNLTVTMIGDLKHGRTVHSLARILTLYEGVQLRYVSPKGLG
MPKNVRDYVQAVGVPQTDFPSLEKAIQDTDVLYVTRIQKERFESESEYEIACQNYIVNDK
TMHHAKEKMAVLHPLPRVFEISPEFDNDTRAAYFRQAENGLYVRMALLAMVLGKC
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttaccggcgttccaattccgttccatccgaggagcctaaagggaccaaagcg
tttctacacttacaagatggttccatcgtggaaggagtgtcttttggagcggagagaagt
gtgggcggagaagttgtgttccaaactggcatggtggggtacacggaatctctcacggat
ccctcctattgtgctcaaatcctcattctcacgtatcctttggttggcaattatggaatt
cccgccgaatgtctgaatgaagagaccaacttgctagaatggttcgaatctcgaacgata
tgggccaacggcttgatagtggatgagttatgcgagactcccagtcattggaaccaccga
caaagcttgagcgaatggcttttggaacaaaacatcccggccattcgaggcgtggacacg
cgtgcactcacccaaaagatccgagagcatgggaccatgttgggcaagatcgtggtgggt
gatgaggatgtgaaccaagttccggatgtggatccggggaaaatcaatctcgtggcagaa
gtgtccttgaagaacaagcaagtgattaaccccaagggatcgcccactatttgtgtggtt
gattgtgggttgaaatacaaccaagtgaggtgtttggtcaaacggggagctcgggttgag
atcgttccgtgggatcatcctttagacgaatcagaatatgacggccttttcttgagcaat
ggtccaggagatccccaagtgtgtgctaagaccgtcaagaatattcaaaacattcttaaa
tcaagtgggaaagtgaaacccatctttgggatttgtttgggacatcaacttttgtctgtg
gctgttggttgtcaaacgaagaaaatgaagtatggtaatcggggccacaaccaaccatgt
gtccatctcacctcaaagcggtgcttcatgaccgctcaaaatcatggttatgatgttgat
gcctcaacaattcccagacattggtcagcattattcacgaacgcgaatgacggcagcaac
gaaggtctagtttccgacgacctacccgtcttctcggtccaattccaccccgagcatact
gccgggcccgaggatctagaatgtctctttgacgcttttttcgatctgattcgacacccg
gacaccaaagccgctgtggctgtggcggatcaaatcaagaaaattaatccgagctttgcg
gcattggatcccgagcaaaactccaccaagcctcggaaagtgctgatcctaggctcggga
ggtctttctattggtcaagccggagagtttgattattccgggtcacaagctatcaaagct
ttaaaagaagaaaatgtgtccaccatcttgatcaaccctaacgtggccactgttcaaacc
agcaaaggtttagctgataaggtctacttcttgcccatcaccacggaatacgtcgaacag
gtgattgaatctgagcgccctgatggggttcttttgacctttggcggtcagacagccttg
aattgtggtgttgaactagatcggatgggaattttctccaaatacaacgtaaagatcttg
ggtacgcccatcaagtcgatcgtagactcggaagatcggaagttatttgctgaaaggatc
gctgaaatcggagagaaagtggctccttcgtgtatcgtgagcactgtggatgaagccctt
caatctgctcatcaacttggctatccggttttggcccgagccgcctatgccttgggaggt
ttgggctccggatttgccaacaacgatcgagaactgcagaaattgaccaagacggcgttt
gctcactcgtctcaagtcatcattgataagtcccttaaaggctggaaggaggttgaatac
gaggtggttcgagatgcttacgacaactgcattacggtttgcaatatggaaaatttggat
ccattgggaattcacacgggggaatcaattgtagtggccccgagtcagaccttgacgaat
cgagagtacaacatgcttcggacaaccgctatcaatatcatccgtcatttgggcgtggtg
ggcgagtgtaatgttcaatacgccctcaacccgaaatccgaacaatactttatcatcgaa
gtgaatgctcgtttgtctcggagctcagccttggctagtaaagccacgggatatcctctg
gcctacattgccgccaaattggcgttgggtcgatctttgtctgacttgaagaacacggtc
acggggtgtacaacggcttgcttcgagccaagtctggattattgcgtggttaagatccct
cgctgggatatgagcaagttttcgcgtgtgagcaccaagatcgggagttccatgaaatcg
gtgggtgaagtcatggccataggtcgaaaattcgaggaagccatccagaaagcacttagg
atggtggacgagtccgttcaaggtttcgacccttatgccaagcctgtttgtgaggaggaa
cttcgcgaacccacggataaacgcatgttcgttttggcttcagccatgaaggctggatat
tccattgacaagctttacgagctcaccaagatcgaccattggtttttaagcaagctccga
aacatcatcgattggtacgagatattggaaaagaaacacgtcgggaacatcaccggtaac
attttgaacggggccaaacagttgggattcagtgataagcagatcgcggctgtgatggaa
agttccgagatggtgattcgatcccggcgacgagagttcgggatcactccttggatcaag
cagatcgacaccgtggctgccgaatggccggcctcgaccaactatctgtatctgacctac
aatggctcgtgccacgacgtggagttctccactcagcctcacaccatggtcatcgggtcg
ggggtgtatcgcattggcagttcggtcgagttcgattggtgcgccgtcggttgtattcgt
gagctccggaggctgggcaagaaaaccatcatggtcaattacaatcctgaaaccgtgagc
accgactacgatatgtgcgatcgtctctactttgacgagatctcgttcgaggtggtcatg
gacatttatcagttggaacatccagaaggcgtgatcctgagtgtgggcgggcaattgccc
aataacattgccatgagtctctaccggcagaaagtgaacgtgttgggaacctctccggag
agcattgataacgccgagaatcgctacaagttttctcgattgttggataccatcgaaatc
aagcaacccaggtggaaggagctcaaagacttccactctgctcgagatttctgccagcaa
gtaggatttccgtgcctggttcgaccctcctatgtcctgagtggtgccgccatgaacgtg
gctcataatgttcaggatctggagacctatctgaacgaagctacggcggtcaggctcagt
aaagaacaccccgttgtcattagcaagtttatcacggatgccaaggagattgatgtggat
gccgtggcgcgcaagggcgagattatctgcatggctgtatccgaacatgtggaaaatgcg
ggtgttcattcaggggacgccactcttgtcaccccaccaggggatatcaatgacgaaact
ttgcagaaaatcaaggacatcacttacaagattgctcaagccttgttcgtgtccggtccc
tttaatatgcaactcattgccaaggacaacgagctcaaggtcattgagtgtaatctccgg
gtgtctcgatcatttccctttgtctccaagactttaggctatgacttcattgccacagcc
accaatgtgattgtgggcaataacccggaaccaattgacgtgctccacggaatcggaaag
gttggagtaaaggtccctcaattctcgttctctcgcttggcgggtgcagatgtgactctg
ggcgtggaaatgtcttccaccggggaagtagcttgctttggagaggatcgctttgaggcc
tatttgaaggccatgatgagtaccggcttcaaaatcccgcaaagcaatattttactctct
gtcggatcgtacaagcacaaagtggaaatcctgcctagcatccgattgctacatgaattg
gactacaagctttatggtagcttgggcacatcggattactttcgagagcacggtataccc
gttgaaccgatcgagtggatgtacgaaaacttgggtgatgacatcaaaatcaactccatg
gccggtcaaatggtcagtatggcagattacctgagtaacaaacactttgatatggtgatc
aacttgccgatgagaacatgtggagcaggtcgagtctcttctttcatcccaacgtatgga
tatcgaacccgcagaatggctattgactacagtgtgcctttgatcacggatgtgaaatgc
gccaagctgctcatcgagtccattggaaaactgaaaaagcaatctccgaaactcaagacc
cacattgattgcatctccagtagccgcatcgtccggttgccagggctgatcgaccctcac
gttcatctacgcgatcctggagccactcacaaagaagatttcgccacggggacggcagcc
gctttagccggtggtgtgaccatgatgctggtcatgcccaacaccaacccttctattgtg
gatgcagagaccttgaccatggccaagggtattgctcgccaaaaggcgtactgtgattat
gcattgaatgtcggcgcctctgctggtaatgccaaactcattgcacccttggccaagcaa
gtgggagctttaaagatgtacctcaatgaaacatttaccacgcttagattggacaacatg
actgattggatgacccactttgaacattggcctttgacctctccaatttgcgttcatgct
gaaggccgtagcactgcggcagctattcttttggctagcttgtacgaccgacctttacat
atttgtcacgtggcgcggaaggacgagatcgagatcatcaaggcggctaaactgaagggt
ctggcgatcacgtgtgaggtgtgccctcatcatttgttcctgaccgaagaacatgccaaa
gccatgggcaatgctgggcaggttcggccgaacttagtcaccaaggaggatcagaacgcc
ttatgggaaaatctggagttcatcgactgttttgccactgaccatgctccacatacactg
gaagaaaaaaacagcgaacaaagtcctcccggattccctggattggagacaatactgcct
ttaatgctgacggctgtcaatcttggccgcatgaccttgaacgacctcaagcagaaaatg
catgacaacgctaaaaggatcttcaatctgcccacccagtccgatacttacatcgaagtt
aacatggacgaagcgtggaccattccagaggaaacgaccttcagtaaagccaagtggacc
cccttcgcggggatgcccgtcattggacgtctcaaacgagtggtcttgcgtggcaagctg
gcttttgtcgatggccaagttctaattgatccaggatttggcgaagatgtccgcacttgg
aagcaaaagctaaccaccttgacggctctagccaaggatccagttggacccagatcaaac
tcgtctttgaccaacacttcaatcaaaaatgcgaacatggcgcccatcgtggagactaaa
ccatcccctcgcccaagtccacaaaccttgcaaaagaagctctcgatccccgttgggatt
cccatgattcgaactcatcacgaccttcagaatcggcacgtcctggaatcgaccatgttt
gacaaggacacgctatattcgatcttcaatctggcagagacgtttcgatcgtgtgtggcc
ttggaccaatcgattgatcacattctcaagggcaaggtcatggcctccatgttctacgag
gccagtaccaggacctcgttgagcttttcagcggccatgcagcgtctgggcggacgggtt
atccagatggatgtaagcacatcatccgtgaagaagggtgaatcgctggaggattccgtg
caagtcatggccggttatagcgatgtcgtggtcattcgacaccccgagcctggcgcggtg
gatcgagctgccaaagtgtgcctaaagcccgtgattaatgcgggcgacggtgtgggcgag
catccaactcaagctctactagacgtgttcaccattcgctcagagattggcacggtcaag
aacctcaccgtgaccatgatcggcgacttgaaacatggtcgcactgtccactctctggcc
agaattttgacactctacgaaggagttcaacttcgatatgtgtcacccaagggtcttggc
atgcccaagaatgttcgagattacgtccaagcggttggggtgccgcaaaccgatttccca
tcattggagaaagccattcaagacacggacgtcttgtacgtgactaggattcaaaaggag
cgattcgaatccgagtcggaatatgagattgcctgtcaaaactacattgtcaatgacaag
accatgcatcatgccaaggagaagatggccgttcttcaccctttgcctcgggtttttgag
atctcgcccgagttcgataatgatacccgagccgcttacttccgacaggctgagaatgga
ttatacgtgaggatggctctattggccatggttctggggaaatgctaa
DBGET
integrated database retrieval system
