Tigriopus californicus (tidepool copepod): 131884832
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Entry
131884832 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131884832
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131884832
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
Ferlin_C
FerB
FerI
Motif
Other DBs
NCBI-GeneID:
131884832
NCBI-ProteinID:
XP_059088699
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All DBs
Position
8:7562903..7598440
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AA seq
1918 aa
AA seq
DB search
MKHDTAMELEAIRCWRESERTISDEEPVKYPNRDVVQRELEALRRLRQQYPNVCEADYHQ
FYHKWALLTDPDDITGVLXGYLKCDINVISKGDPVKIPPKSERDEDDIEANLLLXDGVPA
ERQRAKYIIRIYRADGLPRMNSSIMANLKHAFGGQTRDLVDPYVSVSFAGLTGRTSVKKN
SYAPVWNEQIVFTEMFPPLCQRIKLQLRESDTVGDTVIGTHFLDLSQISNDGDKGFIPTF
GPTFVHLYGSTRDYSLIDEHSTLNDGLGEGVSYRGRLLIALKTDISESIDTAPSEVDVQP
TQTINEAAYGRREEFFLFGCVMDATMIDKRLSDKGIQFELSMGNAGNSLDGQVSTTKTEE
TELLVSEDLGSAESLNGTWSSTTPTIKPLSHDRLYYFLPYWDEKPTMYIRATFPDHRRRL
YQSNAISKVAMKLEEDMKEIHNMIEMEDAGCDTKLKALFEHVQQGCHKFTNLYKSSQSGL
SAPGKTRLDRERGKMCQNEMESIGALARQQKTMKKKSWRDRYRVAQGLLERLRRLIEDPQ
HGLPDVFLWLISGTKRLAYQRISSREILYSMVEEEKGRHCGVMKTIFLKASQSSSFTMAN
RGNSLTNSISDMTTNWLPGRRGAGASGWMIQAKLQVYFWLGSSKHKKSYPSGLPPGFQIT
NELLNAERPALPPPISIHYSEKHFFQLRAHMYQARSLIGSDASGLSDPFARVICGEYCKT
TQVIDETLSPTWDELLVFEEILVYGRREDIKDHPPSIIIEIYDQDKVGKAEFLGRAIGKP
HVFLADSTYKQANLEWFQIYRGNEEAGDLLAAFELFELGESDGSLNLPPLPDAKEAVLGG
PTDSGPILPIPKGVRPTLAKYRFEVLFWGLRDLKRVQFLTVDRPRVDVECAGHIIQSSVI
LNTKKNPNFSATVKFLDIELPEQDIYCPPLTIRVVDCRSFGRFTLVGTHVINSIHKFVYQ
PVTKRDREAEQKKKQQLALKQQMKYAQEMSATSKPRMGGLKLTPKLPKQFPKPPGYARHQ
SVAPTTGADTQAPKDLLALPGDNTDSVRGIGGATSTLELSPLIPKAKDSVITLDYGTYAI
PSGTHGGDLNHQDSPPQQSNSSGIGFGFGARKSAAAIENGGLASPLGPEEDEESMDWWTK
YFASVDAMIEICPKVDPWKLYQNSFPNAIDTSMTPAAIKKLSRSVMDLSSMSEVKGISKS
TSNLMTGGMFLKKSKPKSESKTNLIKHSATSSVESLQLDYLYEDLDEDERQERLEEEGRL
KRGENLVKSEDDQAKSDGGGPLMDEALGGRKKRQGFKSMSSAAKSAASRLSPKGQRKKKK
STVALMKVFPNELEAQSEYHGFTEWLQTFDLYRGKKGEEEFEDDGRIVGKFKGAIKIYKL
PLPKDLDDHTVMGFDPQYGFFQGLPSNDPLHVLVRVYVVKANDLHPMDMNGKADPYLVLQ
LGSKRVSDKENYVSKQLNPVFGKCFEFEATFPQDSILSVSVLDWDLLGSDDLIGETKIDL
ENRFYSRHRATCGIAARYDPCGYNQWRDPMKPVQLLTKLCKEGKVDGPHFSAGKVRVGEK
TFTLQKDDKDPLWQQASTKMSEEHLALAVLHHWHEIPRVGTKLVPEHVETRALYNPDKPG
IEQGKVELWVDLFPMDMPLPGLPLDVSPRKPSPYELRVIIWNTDEVVLEDDAFFSGDKMS
DIYVKGWLKGPDDAQQTDVHYRSLTGEGNFNWRFIFPFDYLAAEEKVVISKKESMFSWDE
TTSKVPARMTLQVWDADHFSKDDFLGAITLDLNRFPRGAKTVKQCSLDMLKTDGSVPMVN
LFKQKRCKGWWPLYIKTDNEGLLLQGKVEAELILLASEEAEKSPAGLGREDPNALEKPTR
PDSSFMWFLNPIKSIRYIVWHNYKWTIIKVLLWLFTVLFLAMFFYALPGYTVKKIMGA
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgacacagcaatggagctggaagccattcgatgttggagggaatcggaaaga
acgatttcagatgaagaaccggtcaaatacccaaatcgagatgtggttcaaagggagttg
gaggccctgcgacgtcttcgccaacaatatcccaacgtgtgcgaggcggattatcatcaa
ttctaccacaaatgggcccttctgacggatcctgatgatatcacgggggtcctannagga
tatctcaaatgtgatattaatgtgatatcaaagggcgatcctgtgaaaatcccccctaaa
agtgaacgagacgaggacgatattgaggcaaacctgctcttancggatggtgtgccagcg
gaaaggcaacgagctaaatacatcattaggatttatcgagcagacggattgccccgaatg
aattcttccatcatggctaacctcaaacatgcatttggcggccagaccagggatttagtg
gatccatatgtttccgtctcatttgcggggcttactggccggacttcggtgaagaagaat
tcgtatgccccggtgtggaacgagcagattgtgttcaccgagatgtttccgcctttgtgc
caacgcatcaagctccaactcagggaaagcgatacggtgggtgacacggttattggaacg
cacttcctggatctcagtcaaatctcgaatgacggcgataaaggttttattccgactttt
ggtccaacatttgttcacttatacgggtccacccgggattacagcctcatcgacgagcac
tcgaccttaaatgacggtctaggagagggcgtgtcttatcgaggacggcttttgattgcg
ctaaaaactgatatatcagaatccattgatacggctccatcagaggtcgatgtccaacca
acacaaaccattaatgaggctgcctatggaagacgagaggagttcttccttttcgggtgt
gttatggatgccaccatgattgacaaaaggttgtccgataaaggcattcagttcgagctc
tccatgggtaacgccggaaattccttggatggacaagtttccaccaccaagaccgaggaa
acggagctcttggtgtctgaggacttgggatccgccgaatccctcaatggtacgtggtca
agcactactccaacaatcaagcccttatcccacgatcgcctctactatttcttgccctac
tgggatgaaaagcccaccatgtacattagggccacgttcccggatcacaggcgaaggttg
taccaatccaatgctatcagcaaagtggctatgaaactggaggaggatatgaaggagatc
cataacatgattgaaatggaggacgcaggctgtgacaccaaactcaaagcactttttgaa
catgtacaacaaggctgccataaattcacaaatttgtacaaaagctcccaaagcggactg
tccgcaccaggaaaaactcgcttggaccgagagcgcggaaaaatgtgccaaaacgagatg
gaaagcattggagccttggcgagacaacaaaagaccatgaagaagaaatcgtggagggat
cgatatcgggttgctcaagggcttctcgaaagattgagacgtctcatcgaagatcctcag
catggtcttcccgatgtgtttctatggctaataagtggtaccaaacgtttggcttatcaa
cggatatccagtcgagaaattctgtattccatggtggaggaggaaaaaggccgccattgt
ggggtaatgaagaccatctttctcaaggccagtcagtccagcagttttaccatggccaac
cggggaaactctctcaccaatagcatctctgatatgacgaccaattggctgccagggcgt
cgaggagccggtgccagtggttggatgatccaggccaaacttcaagtgtatttttggttg
ggatcttccaagcacaagaaaagttatcccagtggcctacccccggggttccagattacc
aatgaacttctcaacgcggagagacccgctttaccaccgcccatttctattcactactcc
gaaaaacacttcttccaacttcgagctcatatgtaccaagctcgttccctgattgggtca
gatgcttccggtttatcggatccatttgctcgcgtcatttgtggagagtactgcaagacc
acccaagtcattgatgaaactttgtccccaacttgggacgaacttttggtgttcgaggag
atcttggtgtacggcagacgagaagacattaaagaccatcctccgtccatcatcatagaa
atctacgatcaagacaaggttggcaaagccgagtttttaggaagggccattggtaaaccg
cacgtatttcttgctgactccacgtacaaacaagccaatctcgagtggtttcaaatctac
cggggaaatgaagaggccggagatctcttggctgcatttgaactgtttgagctcggcgag
tccgatgggagtttgaatcttccgcccttacctgacgccaaggaagcggttcttggtggt
ccaaccgactctggtcccatccttcccatccccaaaggggttcgcccaaccttggccaaa
tacaggtttgaggtcctgttttggggattgcgcgacctgaaacgagttcaatttctcacc
gtggatcggcctcgtgtggatgtggaatgtgctggtcacattatccagtcctctgtgatt
ttgaatactaagaaaaatccaaatttctctgccactgtcaagtttttggatattgagtta
cccgagcaagacatctattgtcctccactgaccattcgtgtggtggattgccgtagtttt
ggccgcttcactttggtcggaactcatgtcatcaacagcatccacaaattcgtgtaccaa
ccagtcaccaagcgtgaccgtgaagcagaacagaaaaagaagcaacaactagcccttaaa
cagcagatgaaatatgcccaagaaatgtctgccaccagcaaaccaagaatgggtggtctg
aagcttacgcccaaacttccaaagcagtttccaaagcctccaggatatgctagacatcaa
tccgtggcccctaccacaggagcggacacacaagctcccaaagatcttttggcacttccg
ggtgacaatacggattcagttcgtgggattggcggcgccacttccaccctcgaattgagt
cctctaatccccaaagccaaggatagtgtcatcactctcgactatggaacgtacgctatt
ccttcggggactcatgggggagacttaaaccatcaggattccccaccacagcaatccaac
tcgagcggaattggattcggatttggcgctcgaaaatccgctgctgccatcgagaatgga
ggactcgcatctcctctgggacccgaagaagatgaagaatccatggattggtggaccaaa
tatttcgcctccgtggatgctatgattgagatttgtcccaaagttgacccttggaagttg
tatcaaaattcatttccgaacgcgattgataccagtatgactccagcggccatcaagaag
ctctctcggtctgtcatggacttatcgtccatgtccgaagtcaaggggatctccaagtcc
acctcgaacttgatgacgggcggcatgtttctaaagaagtccaagcccaaatcagaatcc
aagacgaacttgatcaaacattcggccacatcatcagtcgaaagcttgcaactagattac
ttatatgaagatctagacgaggatgaacgacaagagaggttggaggaggaagggcgcctc
aaacgaggtgagaacttggtcaaatcggaagatgaccaagccaagtccgacggaggaggt
cctctcatggacgaagctctaggaggtcggaagaaacgacaaggattcaaatccatgtcc
agtgccgccaaatcggctgcgtccaggctcagccccaaaggccaacgcaaaaagaagaag
tccaccgtggccttgatgaaggtgtttccaaatgagctcgaggctcaaagtgaatatcat
ggtttcacggaatggctccaaacctttgatctctatcgcggaaagaaaggggaggaagaa
ttcgaggacgacggtcgaattgtgggcaaattcaagggtgccattaagatctacaaattg
cccctgcccaaggatttggacgaccacaccgtgatgggatttgatcctcaatatggattt
tttcaggggctaccttcgaatgatccgctacatgttctggttagagtctatgtggttaaa
gcgaatgaccttcatccgatggatatgaatggcaaggctgatccttacctggttcttcaa
ctcggatcgaaacgcgtttcggacaaagaaaattacgtttccaagcaactcaatcccgtc
tttggaaaatgctttgagtttgaggccacctttccacaagactcaattctttccgtgagt
gttctcgattgggatttgctggggtccgatgatcttattggcgagaccaaaatcgacctc
gagaaccgattctacagtcgccatcgtgccacttgtgggattgcggcccgttatgatcct
tgcggctacaatcaatggcgagatccgatgaaacccgttcaacttctgaccaaactgtgc
aaagagggaaaagtggatggaccccatttctcggctggcaaagttcgagtgggtgaaaaa
acgttcacgcttcaaaaagacgacaaagatccactgtggcaacaagcctcgaccaaaatg
agcgaagagcacttggccttagccgtgcttcaccattggcacgagattcctcgggtggga
accaaactagtgcccgagcatgtggagaccagggctctttacaatcccgataagcctggc
atcgagcagggcaaggtcgaactttgggttgatttatttcccatggatatgcctttgcct
ggccttcccttggacgtgtcgccacgcaaacccagtccttacgagcttcgagtcatcata
tggaacacggacgaggtggttctcgaggatgacgcttttttctctggggataagatgagt
gacatctatgtgaaagggtggctcaaagggccagatgatgcgcaacaaactgatgtccat
tatcgttctttgacgggtgaaggcaacttcaactggcgttttatcttcccattcgactat
ttggccgccgaagaaaaggtggtcatttccaagaaagagtccatgttctcgtgggatgag
accacgagcaaggtccctgctcgaatgacactacaagtttgggatgccgatcacttcagc
aaggacgatttcctgggcgccatcacgttggacctgaatcgattcccaaggggagccaag
accgtgaaacaatgttcattggacatgctcaaaactgacgggtctgttcccatggtgaac
ctgttcaagcagaaacgatgcaaaggctggtggcctctctacatcaagactgacaacgaa
ggcttgctgcttcaaggtaaagttgaggcagaattgattttgctagcttcagaggaagca
gagaaaagtcccgcgggccttggtcgagaagatcccaatgctttggaaaaacccactcgc
cctgattcgtctttcatgtggttcctgaatcccatcaagtctattcggtacatcgtgtgg
cacaactataagtggacgataatcaaagtgcttctgtggcttttcaccgtgctgttctta
gccatgttcttctatgcgttgcccggatatacggtcaaaaaaatcatgggggcctaa
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