Tigriopus californicus (tidepool copepod): 131885687
Help
Entry
131885687 CDS
T09700
Name
(RefSeq) AP-4 complex subunit beta-1-like
KO
K12401
AP-4 complex subunit beta-1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131885687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885687
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Others
AP-4 complex
131885687
BRITE hierarchy
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
PDS5
2-oxogl_dehyd_N
Pro_3_hydrox_C
Motif
Other DBs
NCBI-GeneID:
131885687
NCBI-ProteinID:
XP_059089793
LinkDB
All DBs
Position
8:complement(8317983..8321411)
Genome browser
AA seq
612 aa
AA seq
DB search
MSRTRNSSSSSVSGSASGSSWGSNPAEAPLPWNWSSSLRPAVNGPPVPPLSPAAIQRLFS
RYLANPASVHPPEETQRIIRILEKIPDMLDAHTLTSDQILSHCVKLMAANHETVKRLACQ
LLIRIAQEQSEVALLAANVLHLDRQDPNPNVRAVAVATLCSIPGLAEAHAVPAIQAAWQD
SNPRVRQAGITGCGKVWLHSPDVVEDHGLVDALYQRIKDPDPTVLTFTMQTLNYILAQEG
GIVINGHMTQYLLQRLPDFPDVELLFVLEYLSDFVSANPAVNSAIKLQMVNQLDPYFESS
NGPVFLAAGVLFYRTALDLLARDRAMVGESRLLSDFLIRIRPLISKFLKPSSQPAIQDFQ
VQLLDFVLSWDRKLSAQASCLWLEFRIKDTKDLAALKGQKIRAMAHVVSAESEVEMVQYL
LSLLKSQKLQTEVLTSALLDICERSSDPEVVSAIVTREFQSLAQTDEGTVLVLLRQLRAM
DRVLHVGANPDFLRLLFADIHTRRIELNDFQVLANILWALGTYGQQISEAPYILEYLTDE
KFDLIEKWELKQSLLYNGFRCFLFHPAVIQPVLGRIGELCSVSRKVNHRINLYFKLLSRP
DVLERQRRCLTS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaacccggaattcttcctcctcttcagtgtccggctccgcctccggctcctca
tggggatcgaatccggccgaagcccctctgccgtggaactggagtagttcgctccggcct
gctgtcaacggtccgcccgtccctccgctcagcccagccgccatccagcgtttgttttct
cgctatttggccaacccggccagcgtccatcctccggaagaaactcagcgaatcatccgt
attttggaaaaaattccggatatgttggacgctcacacattgacttcggaccaaatcttg
tcccattgcgtcaaattgatggccgccaaccatgagacagtgaaacgcttggcgtgccaa
cttcttattcgcattgcccaagaacagtctgaggtagcgcttttagccgccaatgtgctc
catctcgatcgtcaagaccccaatcccaatgtccgggcagtggccgtggccacgctttgc
tccattcccggcttggccgaagcccatgccgttccagctatccaagccgcttggcaagat
tcgaatccccgcgtccgccaagccggtattacaggctgtggcaaggtttggttgcattcg
ccggatgttgtggaagatcacggactagttgatgccctctatcaacgcattaaagatccg
gatcccaccgtacttactttcaccatgcagaccttgaactacatcttagctcaagaaggg
gggatcgtgatcaacggccatatgacgcaatatctgcttcaacggttgcctgatttcccg
gatgtagaattgctctttgtgctagagtacttatccgacttcgtcagtgccaatcctgcc
gtcaactcggccattaaactccaaatggtgaaccaattggacccttattttgagagctcc
aatggcccagtgttcttggcagcgggcgtgttgttttatcgcactgctttagacttgtta
gcccgtgatcgagctatggtgggcgaatcccggcttttatccgatttcttgatacgaatc
cgaccgcttatctctaaattcctgaagcccagctctcagcccgcgatccaagattttcaa
gtgcaattactagactttgttttgtcttgggatcgcaagctctccgcacaagcgtcttgt
ctttggctggaatttcgtatcaaggataccaaagacttagcagccttaaaaggtcaaaaa
attcgtgccatggcccatgtggtttcggcagagtcagaggtggaaatggtccaatacctc
ttgtctctgctcaagagccaaaagctacaaactgaagttcttacctctgctctgttggac
atttgtgagcgctcaagcgatccagaggttgtgtctgcgatagtgactcgtgaatttcag
tccttggcgcaaacggatgagggcactgtattggtcttattgagacaattgcgagccatg
gatcgggtgctgcacgtcggtgctaatccggatttcttgcgccttctcttcgctgatata
cacacccgtcgaatcgagttgaatgactttcaagtactggccaacatattgtgggccttg
ggaacatatgggcaacaaatttcagaggcgccctacatactggaatacctgacggacgag
aaattcgatttgattgaaaagtgggaattgaaacagtcgcttttatataatggctttcga
tgtttcctcttccaccctgctgtgatccaacccgtgttaggtcgtatcggcgaattatgt
tcggtgtcgagaaaagttaaccatcgcattaacttgtatttcaagctcttatcccggcct
gacgttttagaacgtcagagacggtgcctgacctcttga
DBGET
integrated database retrieval system
