KEGG   Tigriopus californicus (tidepool copepod): 131885791
Entry
131885791         CDS       T09700                                 
Name
(RefSeq) actin, clone 403
  KO
K05692  actin beta/gamma 1
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03082  ATP-dependent chromatin remodeling
tcf04145  Phagosome
tcf04814  Motor proteins
tcf04820  Cytoskeleton in muscle cells
tcf05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131885791
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    131885791
  09142 Cell motility
   04814 Motor proteins
    131885791
   04820 Cytoskeleton in muscle cells
    131885791
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    131885791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcf03021]
    131885791
   03019 Messenger RNA biogenesis [BR:tcf03019]
    131885791
   03036 Chromosome and associated proteins [BR:tcf03036]
    131885791
   03029 Mitochondrial biogenesis [BR:tcf03029]
    131885791
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tcf04812]
    131885791
   04147 Exosome [BR:tcf04147]
    131885791
Transcription machinery [BR:tcf03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     131885791
Messenger RNA biogenesis [BR:tcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     131885791
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     131885791
    NuA4 complex
     131885791
  Chromatin remodeling factors
   BAF complex
    131885791
   PBAF complex
    131885791
   GBAF(ncBAF) complex
    131885791
   SWR1 complex
    131885791
Mitochondrial biogenesis [BR:tcf03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    131885791
Cytoskeleton proteins [BR:tcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     131885791
Exosome [BR:tcf04147]
 Exosomal proteins
  Proteins found in most exosomes
   131885791
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 131885791
NCBI-ProteinID: XP_059089943
LinkDB
Position
1:complement(9580809..9582847)
AA seq 376 aa
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITSLAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtgtgacgatgatgttgccgctctggtcgtggacaacgggtccggtatgtgcaaagcc
gggttcgcgggtgacgatgcgcctcgtgccgtgttcccctcgatcgtgggccgaccccgt
catcaaggtgtgatggtgggcatgggccagaaggactcttatgtaggcgacgaggcccaa
tccaagcgaggcatcttgaccctgaagtaccccatcgagcacggcatcgtgaccaactgg
gatgacatggaaaagatctggcatcacaccttctacaatgagttgcgtgtggcccccgaa
gagcatcccgtgctcctgaccgaggcccctcttaaccccaaggccaatcgtgagaagatg
actcaaatcatgttcgaaaccttcaatacgcccgccatgtacgtggccatccaagccgtg
ttgtccctgtacgcttccggtcgtaccactggtattgtcttagattccggcgatggtgtg
tctcacaccgtgcccatttatgaaggttacgccttgccccatgccattctgcgtctggat
ttagccggtcgtgacttgaccgactacctgatgaagatcttgactgagcgtggttattcg
ttcaccaccactgccgagcgagaaatcgtgcgcgacatcaaggagaagctgtgctatgtc
gccctcgactttgagcaagaaatggccaccgccgcctcttcctcgtcgctggagaagtcc
tacgaattacccgacggacaggttattaccatcggtaatgagcgattccgttgccccgag
gccctcttccaaccctctttcttgggtatggaatcttgcggtattcacgagaccacctac
aactcgatcatgaagtgcgacgtggacatccgtaaggacttgtacgccaacactgtcttg
tccggcggcaccaccatgtaccccggcatcgctgatcgcatgcaaaaggagatcacttcc
ttggcccctaccaccatgaagatcaagatcatcgctcctcccgagcgcaagtactcggtc
tggatcggtggctccattttggcttccctctccaccttccaacagatgtggatctccaag
caagagtacgacgaatccggcccctccatcgttcatcgcaagtgtttctaa

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