Tigriopus californicus (tidepool copepod): 131886972
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Entry
131886972 CDS
T09700
Name
(RefSeq) presenilin-1-like
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
131886972
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131886972
Peptidases and inhibitors [BR:
tcf01002
]
Aspartic peptidases
Family A22: presenilin family
131886972
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
131886972
NCBI-ProteinID:
XP_059091439
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Position
9:complement(4725549..4727931)
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AA seq
497 aa
AA seq
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MAAREEPVPVASARNMGGSRPQSREIQTSTSSSSFLPPGPNVIIRDPNHDGPAPPLNPPD
RTAPSRSRSEPLAPGPPPRRGRGAGPGPEPVILDEEEELDLKYGAHHVIMLFTPVTLCMA
VVVATIASVTFYREKDGVYLVYTPFHEKNDDVGSNTWEAFANAGILLGVIAVMTFVLIFA
YKYKCYRLIHGWLFLSSLLLLFLFTYIYFGEVFKSYNIPFDYISLAFCLWNFGVVGMICI
HWKGPLLLQQAYLVFISALMALIFIKYLPNITTWVVLGAISLWDLFAVLAPFGPLRILVE
TAQERNEQIFPSLIYSAGVIYTLVGAAERPAGEQDDDATRNAQDTESAPGPPRRPPRGQR
TGSTPSPHDEADGFDRQWVRQNQNQSEASSQQRVIPPPRPLEMEEEEDRGIKLGLGDFIF
YSILVGKASSYGDWNTTLACFVAILIGLCLTLMFLAIFRRALPALPFSIAFGLVFYFATR
EIIAPFADTLSSQQVFF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgtgaagagccggtccccgtggcttcggctcgaaatatgggcggatcccgg
ccccaatctcgcgaaatccagacgtccacctcttcttcgtccttcctaccacccggcccc
aacgtcataataagggatcccaaccatgatggccccgcccctccactaaacccacccgac
cgaacggcgccgtccagatcacggtcggagcctttagcccctggtccgcctcctcgacgt
gggcgtggagcgggtccgggtcctgagcccgttatcttagatgaagaggaggaactggac
ttgaagtacggggcccatcacgtgatcatgttgttcacgcccgtcactttgtgcatggcg
gtggtggtggccaccatcgcctccgtcaccttttatcgggagaaggacggcgtgtatctg
gtgtacacgcctttccacgagaagaacgacgatgtgggctcgaatacgtgggaagcattt
gccaatgcgggcattttattgggagtcatagccgttatgacgttcgtcttgatttttgca
tacaagtacaagtgttaccggctcattcacggctggttgttcctctcttcgttgttgcta
ctgttcttgttcacctacatctacttcggagaggtgttcaagtcctacaacatcccattc
gattacatctcgctggcattttgcctctggaactttggtgtggtgggtatgatttgtatc
cactggaaaggccctctattgctccaacaggcctatttggtcttcatttcggcgctcatg
gcgttgatcttcatcaaatatctgcctaatatcaccacatgggtcgtcctgggagccatt
tctttgtgggacttattcgccgtcttggccccattcggtcccctccggattctggtggaa
actgctcaagagcgcaatgagcaaatcttcccctctctgatttactcggcgggagtcatt
tacactttggtgggagccgccgagcgaccggcaggagaacaagatgacgacgccactagg
aacgcccaagacacggaatcggctcctggcccaccccgacgacctcctcggggacagcga
actggttccacaccctccccccatgacgaagctgatggctttgatcgacagtgggtgcgt
cagaatcaaaaccaaagtgaggcttcgtctcaacaacgtgtgattccaccaccgcgacca
ttggaaatggaagaggaggaagatcggggcattaaattgggcttgggagatttcattttc
tattcgatattggtgggaaaagcatcttcgtatggtgattggaacactactctggcatgt
tttgtggccatcttgatcggtctgtgtttaactttgatgttcttggccattttccgccgc
gctcttccggctttgccgttctccattgcatttggtctcgtgttttatttcgcaacacga
gaaatcattgcccccttcgctgacacgctgtcatcacagcaagtatttttctga
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