KEGG   Tigriopus californicus (tidepool copepod): 131889053
Entry
131889053         CDS       T09700                                 
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03420  Nucleotide excision repair
tcf04120  Ubiquitin mediated proteolysis
tcf04141  Protein processing in endoplasmic reticulum
tcf04310  Wnt signaling pathway
tcf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131889053
   04120 Ubiquitin mediated proteolysis
    131889053
  09124 Replication and repair
   03420 Nucleotide excision repair
    131889053
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    131889053
   04350 TGF-beta signaling pathway
    131889053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcf04121]
    131889053
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131889053
Enzymes [BR:tcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     131889053
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   131889053
  Multi subunit type E3
   SCF complex
    Ring finger protein
     131889053
   Cul2 complex
     131889053
   Cul3 complex
     131889053
   Cul4 complex
     131889053
   Cul7 complex
     131889053
   Cul8 complex
     131889053
   Cul9 complex
     131889053
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131889053
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131889053
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 PHD_NSD zf-RING_16
Other DBs
NCBI-GeneID: 131889053
NCBI-ProteinID: XP_059094028
LinkDB
Position
10:8274047..8275133
AA seq 110 aa
MEVDQDAEMPSSSSSSNRGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQA
NQASASSEECTVAWGMCNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGH
NT seq 333 nt   +upstreamnt  +downstreamnt
atggaggtcgatcaagatgccgagatgccctcctcctcctccagttccaatcggggcgag
aagaagaggtttgaggtgaagaaatggaatgccgtggctctgtgggcctgggacattgtg
gtggacaattgcgccatttgtcggaatcacatcatggatctgtgcatcgagtgtcaagcc
aatcaagcctcggcctcaagtgaggaatgcaccgtggcttggggcatgtgtaatcatgct
tttcatttccattgcatttctcggtggctgaagacccgtcaggtgtgtcctttggacaac
agagattgggagtttcaaaagtatgggcactga

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