Tigriopus californicus (tidepool copepod): 131889112
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Entry
131889112 CDS
T09700
Name
(RefSeq) NHP2-like protein 1 homolog
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03008
Ribosome biogenesis in eukaryotes
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131889112
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131889112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889112
03009 Ribosome biogenesis [BR:
tcf03009
]
131889112
Spliceosome [BR:
tcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131889112
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
131889112
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
131889112
NCBI-ProteinID:
XP_059094102
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All DBs
Position
10:7826937..7827675
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AA seq
129 aa
AA seq
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MTTDGDVNPKAYPLAEQALTTKILNLVQQAVNYKQLRKGANEATKTLNRGQAEFVVLAAD
AEPLEILLHIPLLCEDKNVPYVFVRSKQALGRACGVSRSVISASITQNEGSQIKPQITTI
QNEIEKLLV
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgacggtgatgtcaatcccaaggcttaccctttggccgagcaggcccttacc
accaagatcttgaacctggttcaacaagctgttaactacaagcagcttcgcaagggtgcc
aacgaagccacgaaaaccctgaaccgcggccaagcggagttcgtagtgttggcggccgat
gccgaaccattggaaattctgctccatattccgttgttgtgcgaggacaagaacgttcct
tatgtgtttgttcgctccaagcaagctttgggacgagcttgcggtgtgtcacggtccgtg
atttcggcttccatcacccaaaatgaaggatctcaaatcaagccccagatcaccaccatt
caaaacgaaatcgagaagcttttggtgtga
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