Tigriopus californicus (tidepool copepod): 131889136
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Entry
131889136 CDS
T09700
Name
(RefSeq) fringe glycosyltransferase-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00514
Other types of O-glycan biosynthesis
tcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
131889136
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
131889136
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131889136
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
131889136
Glycosyltransferases [BR:
tcf01003
]
Glycan extension
O-Glycan
131889136
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
131889136
NCBI-ProteinID:
XP_059094138
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All DBs
Position
1:complement(2055587..2062882)
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AA seq
343 aa
AA seq
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MKVLMKHIVIAITAGLTLAVVGVLLLRSHSPQPSTHSFRMIWRQHKLKLLDHNLRKRSLT
APSFPTSLKDVFISVKTSKRFHRSRLDVILKTWHTLAKDQIWFFTDDDDLRVAKRVQSGH
LINTKCSSSHNRSSLCCKMAAEIMAFASTPDKRWFCHFDDDNYVNIPALVKMLQHFNPED
ELYLGKTSIPEPINVLDHIQDQRKNVSKKKVSFWFATGGAGFCLSRPLVEKILPKVRDNA
FVATGESIRLPDDVTVGYIIEHLFKTRLTPVPKFHSHLEALKLIPQESFSDQISFSYSTY
SDQEQNIVQIGGLSEAKDPTRFLSIHCHLFPGTIKACDRIVRM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctaatgaaacatatcgtgattgccatcaccgcaggtttgaccctggctgtg
gtgggcgtgttactgctcaggtcccactcccctcaaccttcaacacattcctttcgcatg
atttggcgacaacacaagctgaagctccttgaccacaaccttcggaaaagaagtctgacg
gctccgagcttcccaacctccctcaaggatgtgttcatctcagtgaaaacctccaaacga
ttccaccgttctcggttggatgtgatcctgaaaacttggcacaccttggccaaagatcag
atttggttcttcacggatgatgatgatttgagggttgccaagcgggtccaatcgggtcac
ttgatcaatacgaaatgctcctcttcccacaatcgatcttcactttgttgcaaaatggcc
gcggaaatcatggcgtttgccagcactccggacaagagatggttttgccatttcgatgac
gataattacgtgaatatccccgctttggtcaaaatgctccagcacttcaaccctgaagac
gaactctacctggggaagacttcgatcccagaaccaatcaatgttctggatcacatccaa
gatcaacgcaaaaatgtaagcaagaaaaaagtatccttctggttcgcaacaggaggtgcc
ggattttgccttagtcgacctttggtggaaaaaatactacccaaagtgagggataatgct
ttcgtagcaacgggcgagtccatccgattaccggatgacgtgaccgtgggatatatcatt
gaacatctcttcaaaacccgacttaccccagttccaaagtttcactcacatctcgaggcc
ctcaaactcattccccaagagtcgttttcggatcagatttcattcagctattccacttat
tctgatcaagaacagaatattgtacaaattgggggcttgtccgaggcaaaagaccccaca
aggtttttatccatccattgtcatttgtttccgggcacgatcaaggcatgcgatcgcatt
gtaagaatgtga
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