KEGG   Tigriopus californicus (tidepool copepod): 131890371
Entry
131890371         CDS       T09700                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03008  Ribosome biogenesis in eukaryotes
tcf03013  Nucleocytoplasmic transport
tcf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131890371
   03008 Ribosome biogenesis in eukaryotes
    131890371
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    131890371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcf03019]
    131890371
   03009 Ribosome biogenesis [BR:tcf03009]
    131890371
   03016 Transfer RNA biogenesis [BR:tcf03016]
    131890371
   03036 Chromosome and associated proteins [BR:tcf03036]
    131890371
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcf04147]
    131890371
   04031 GTP-binding proteins [BR:tcf04031]
    131890371
Messenger RNA biogenesis [BR:tcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     131890371
Ribosome biogenesis [BR:tcf03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    131890371
  Pre-60S particles
    131890371
Transfer RNA biogenesis [BR:tcf03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    131890371
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     131890371
   Spindle formation proteins
    131890371
Exosome [BR:tcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131890371
GTP-binding proteins [BR:tcf04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    131890371
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Gtr1_RagA G-alpha ArgoMid AAA_24 Pox_A32 Septin AAA_7 TsaE DUF5906 AAA_16 DAP3 AAA_22
Other DBs
NCBI-GeneID: 131890371
NCBI-ProteinID: XP_059095690
LinkDB
Position
11:complement(7690095..7691199)
AA seq 215 aa
MAEGQDMPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIRF
NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLTG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LVPPEVQMDPQWQQKVEQEYKEAQETALPEDDEDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccgaaggacaagacatgcccaccttcaagttggtgctggtaggagacggtgggacc
ggtaagaccacctttgtcaagcgccatctgacgggagaattcgagaagaagtatgtggcc
acgttgggcgttgaggtgcatcccttggtgttccacaccaaccgcggagccatccgattc
aatgtgtgggacacggccggacaggaaaagtttggcggtctccgcgacggatactacatt
caaggccaatgcgccatcatcatgtttgacgtgacctcgcgggtcacttacaagaatgtg
cccaattggcatcgagacttggtacgcgtctgcgaaaacatccccatcgtcttgacaggt
aacaaagtcgacatcaaagatcggaaagtcaaggccaagtccattgtcttccatcggaag
aagaacctccaatactacgatatctcggccaagtccaactacaacttcgagaagcccttt
ctgtggttggcgcgcaaactgatcggggatcccaatttggagttcgtggccatgccggcc
cttgtccccccagaggtgcaaatggatcctcaatggcaacaaaaggtcgagcaagagtac
aaggaggcccaagagacggccctgcccgaggacgacgaagatttgtaa

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