Tigriopus californicus (tidepool copepod): 131890593
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Entry
131890593 CDS
T09700
Name
(RefSeq) DNA polymerase kappa-like isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
131890593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131890593
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131890593
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
131890593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
RNF220
Sgf11
DUF7560
Arm-DNA-bind_3
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
131890593
NCBI-ProteinID:
XP_059095946
LinkDB
All DBs
Position
11:complement(5419103..5422420)
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AA seq
613 aa
AA seq
DB search
MEDKHNKDANKAVPLMSLNDTKAGMEGLDKTKIDAIIQTHSQGSKFYAAKLKSQTRITEQ
VQKIQGSYGGLSASAIQQAETQADQLVAELRQGRDLSRTIVHVDMDAFYAAVEMRDQPAL
KTKPMAVGSLGMLSTSNYEARKFGVRAGMPGFIGLKLCPKLTLVPLNFEKYHEVSRQVRA
VFREYDANFCPMSLDEAYLDLTEHLEELRQRGLDPDPRPVVQEIRAKIEAQTTLTASAGI
APNTMLAKVCSDQNKPNGQFYLPPDVEEIMAFVNPLPIRKVSGIGNVTEQLLKAVHVSTC
QDLYEKRGVLKLLFSDISYHSFIRISLGIGSTRLSDWNERERKSLSTETTFRDTSDVSEL
QEICTSLCQDLAQELTQHGLQGRSVTLKVKTHDFQVRTKVKHLLEATAEADKIEVVAKSL
LKFFMDNTQAKPLKLRLMGVRMSGWESDKSAGAGQTSIAAYMGKKRKDTTSVFDCPSCGQ
KIQAQSQNQFNRHLDSCLLGGESQGSTEASPKPGKKAKLDDERCISTQNDGLVPSNAQEA
MTHSSSGPANVACPICREKLPNLDPAVNAHIDECLNRQEIAQISGNKRPLDGESSSHKRK
RSKAIDQYFNKPS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagcataacaaagacgcaaacaaggccgtgcccttaatgtccttgaacgac
accaaagccgggatggaaggtttggataagaccaagatcgatgccatcattcaaacccac
tcccaagggtctaaattctacgcagccaagctcaaaagccagactcgcatcacggaacag
gtccagaagatccaagggtcttatggaggtctcagtgcctccgctattcaacaggctgag
acccaagctgaccaattggtagccgagctccgccagggtcgagatttatcacgcaccatt
gttcacgtggacatggatgcattttatgcggcggtagaaatgcgcgaccaaccggccttg
aagaccaagcccatggcggttgggtcgctaggcatgttatccacctcgaattatgaggcc
cggaaattcggggtacgggcaggtatgcctgggttcatcggtctaaagctctgtccaaag
ctgaccttggtccctttgaactttgaaaagtaccacgaggtcagccgtcaagtacgagcc
gtgttccgggagtacgatgccaatttttgccccatgtctttagacgaggcctacttggat
ttgacggagcatttagaggaactgaggcaacgcgggttggatccagatccccggccagtg
gtgcaggaaatacgggcaaaaatcgaggcccagaccacgttaacggccagtgctggcatt
gcccccaacaccatgttggccaaggtttgttcggatcaaaataaacccaatggtcagttt
tatttgccaccggatgtggaggaaatcatggcctttgtgaatccattgcccattcgaaaa
gtgagcgggatcggcaacgtcacggagcaattgttgaaggccgtgcatgtgagcacatgt
caggatttgtacgagaaacgaggcgttctcaaactcctcttcagtgacatcagctaccac
tccttcattcggatctcccttgggatcggatccactcgattgtcggactggaacgagcga
gaacgcaagtccttgagcacggaaaccaccttccgagacacgagtgacgtgtccgaactc
caagaaatatgcacctctctgtgtcaggatctggctcaagagcttactcagcacggtctt
caaggccgttcagtgaccctgaaagtcaagacgcacgacttccaagtgcgaaccaaggtc
aagcacttgctggaagccacggctgaggcggataaaatcgaagttgttgccaagagcttg
ctcaagttctttatggacaacacccaggccaagccgttgaaattgcggctcatgggggtg
cggatgagtgggtgggagagcgacaaatctgccggtgctggacagacctccattgccgca
tacatgggcaagaaacgaaaggacacaacgagcgtgtttgactgtcccagttgcggccag
aaaattcaggcccagagtcaaaatcaatttaatcgtcatcttgattcatgtctcttgggc
ggggaaagtcagggctcaaccgaggcgtcgcccaagcccggcaaaaaggccaaactcgat
gacgaaaggtgtatttccacccaaaacgatggacttgttccctctaacgcccaagaagca
atgacccattcttcttccggtccagcaaatgtggcgtgtcccatttgccgcgagaaattg
cccaatttggacccggcagtcaacgcccacatcgacgagtgtttaaatcgtcaagaaatc
gctcagatatccgggaacaaacgcccactagacggcgaatcgtcctcccacaaacggaag
cgatccaaggccattgaccaatactttaacaaaccttcttga
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