Thermodesulfobacterium commune: HL41_01770
Help
Entry
HL41_01770 CDS
T03212
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm01501
beta-Lactam resistance
tcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HL41_01770
01503 Cationic antimicrobial peptide (CAMP) resistance
HL41_01770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcm02000
]
HL41_01770
01504 Antimicrobial resistance genes [BR:
tcm01504
]
HL41_01770
Transporters [BR:
tcm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HL41_01770
Antimicrobial resistance genes [BR:
tcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HL41_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
POC1
Motif
Other DBs
NCBI-ProteinID:
AIH03648
UniProt:
A0A075WTE6
LinkDB
All DBs
Position
322106..325225
Genome browser
AA seq
1039 aa
AA seq
DB search
MISKFFIERPRFAAVVSIFFVLLGILAIQVLPIQEYPALTPPQIMVRTVYPGADAETVLK
TVVTPLEESINGVPNMIYMSSTASSSGDVNINVYFEVGTDVNVAKMDVNNRVQMALSKLP
EEVRRQGVQVRERSPDIALAVAFISQGGVRSPVEISNFVLINVVEELKRIPGVGDVVIFD
DKSYSIRVWLKPDKLAKYGLTPIEVAQAIASQNQQFSAGGIAQEPTDKAYSFSYTVKGDP
RFEKVSQFENIILRSNPDGSKLLLKDVATVELSSENFNRQSSYKKDPAIPVGIFLAPNAN
LLEVNKKVKETLKQLSHNFPEDIKFYYPYDPTLYVKEAIKEVIVTFVIALVLVVFVIYIF
LGSLKATIIPVLAIPVSIIGTFAGMYALGFSINLLTLFGLVLAIGLVVDDAIIVIENAER
IKRVKRLSSKEATIEAMQEITGPIIAIVLVLSAVFIPAAFLGGFTGAFYRQFAVTIAISM
ILSGIVALTLTPALCARFLEEEHKKMPLPIRLFNLFFFKSRKWFVNTVKNFLRFVPIGIA
VFIFVVIGTIFFIKRLPTGLVPFEDDGLLNIFTNLPPGSSLKRTINVANEISDTLAKTKE
IEEWINIAGLDLQTFGFKSDSLTTFIHLKDWKERKGREHSSFALVQRLNQQFAKNREALI
FVVNPPPIRGMSLVGGFEMYIQDRSGRPLSDLYKYVQEIVAKANQRPELTAVRTTFVPNV
PTYKVTVDREKAKAYEVDVDEVYRTLNIVFGKYYVNDFNLYGRIFHVNLGAEGEYRDDLR
DYSYVYVRSKNGNLIPISSLIKVELIPDAPILEKFNMFVSAKVLGNPKPGYTSGDAIKAI
SEVAKEVLPPGYTIAWAGTSYQEVKVQTKGNLALIYALIFIYLILVALYESWTAPLAILL
SAPFALFGAALGLNLFGLQNDVYFQAGLLVLIGLSAKNAILIVEFAEERLKRGMGLVEAT
IEAAYLRYRPIMMTSFAFIAGAIPLMFASGAGANSRMIIGTTVVMGMTFATLFGVFFIPL
FYYVVVKLRERFSKITGRK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaagttttttatagaaaggccgagatttgcggcagtagtttctatctttttt
gttttgcttgggattttagctatacaagtactccctatccaagaatatccagcccttacc
cctcctcaaataatggttagaactgtttatcctggggcagacgccgaaactgttttaaaa
acagtagttactcctttagaagaaagtattaacggtgtccctaacatgatttatatgtca
agtactgcttcttcaagcggagatgttaacataaatgtttactttgaagtagggactgat
gttaacgttgcgaagatggatgtaaataacagggtacaaatggccttgagtaaacttcct
gaagaggtaagaagacaaggagttcaggtaagagaacgttcccctgacattgctttggcg
gtagcttttatctctcagggaggggtaagaagcccggtagaaatttctaactttgttttg
ataaacgtggtagaagagttaaagcgtatacccggggtaggagacgttgtaatttttgat
gataaaagttattctatcagggtttggttaaaacccgataaacttgctaaatatggttta
accccgatagaagtagcccaagctattgcgtctcaaaatcaacagttttctgcaggaggt
atagctcaagaacctacagataaggcttatagtttttcttacaccgtaaaaggagatcca
aggtttgaaaaggtttctcagtttgaaaacatcatcttgaggtcaaatcctgatgggtct
aagctacttttaaaggacgtagcaaccgtagagttaagttcagagaactttaacagacag
tcttcttataagaaagatcctgctatcccagtaggtatttttttagcacccaatgctaac
cttttagaagtaaataaaaaggtaaaagagacgttaaaacagctttcgcataactttcca
gaggatataaaattttattatccttacgacccgactctttatgttaaggaggctattaaa
gaggttatcgttacttttgtaatagctttagttttagtagtgtttgttatttatattttt
ttaggtagtttaaaagctactatcatccctgtacttgccatacctgtttctatcattgga
acatttgctggcatgtatgccttaggtttttctatcaaccttcttaccctttttggtctg
gtattagccataggacttgtggtagatgatgccatcatcgtgatagaaaatgcagaaaga
ataaagagggttaaaaggctttcttctaaagaagcaaccatcgaggctatgcaagagata
acagggcctatcatagcgatagtacttgtgctttctgcggtttttatccccgcagccttt
ttaggaggttttaccggtgctttttatcgtcagtttgccgtaaccatcgctatttctatg
atcctctctggaattgtagctctcacactgaccccagccctttgtgcaagatttttagag
gaagagcataaaaagatgcctttacctattagattgtttaatctattcttttttaaaagt
agaaagtggtttgtaaacacagttaaaaattttcttagatttgtaccgataggaatagcg
gtatttatttttgtggtaataggaactatattttttatcaaacgtctacctacaggacta
gtgccttttgaagatgatggtcttcttaatatctttactaacctacctccaggatcttca
ttaaaaagaacgataaatgttgccaacgaaataagtgataccttagccaaaaccaaagaa
atagaggagtggataaacatagcaggtctcgatttgcaaacttttggttttaaaagcgat
tctttgactacttttattcatctaaaggattggaaagaaaggaagggtagagaacattct
tcatttgctttggttcagagattaaatcaacaatttgcgaaaaaccgggaggctttaatc
tttgtagtaaatccacctcctattagaggcatgagtttggtaggtggttttgaaatgtat
atccaggataggtcaggaagacctctttctgacctttataaatatgttcaagagatagtg
gctaaagctaatcaaaggcctgaacttaccgcagttagaaccacttttgttcctaatgtt
cctacttataaggttacagttgacagagaaaaagctaaggcctatgaggtagatgtagat
gaagtttatcgtactttaaacatcgtgtttggtaaatactatgttaatgattttaacctt
tacggtagaatttttcatgttaacttaggtgcagaaggtgaatatcgtgatgatttaaga
gattatagttatgtctatgttcgctcaaaaaatggaaacttgatccctatcagtagtttg
attaaagtagagttaatcccagatgctcctattttagaaaaatttaatatgttcgtaagt
gctaaagttttaggaaatcctaagcctggatatacttcaggtgatgctatcaaggctatt
tctgaggtagccaaagaagttttacctccaggatatacgatagcctgggcaggaacgtct
tatcaggaggtcaaggtacaaactaagggtaatttagcccttatatatgccttaatcttt
atttatcttatcttggttgcgctttatgaaagctggactgctccccttgccatcctctta
agtgcaccttttgccctttttggggcagccttgggattaaatctttttggtttacagaat
gacgtatatttccaagcagggcttttggttttgatcggactttctgccaaaaatgctatt
ttgatcgttgagtttgcagaagaaagattaaaacgtggtatggggttggttgaagcaacg
atagaggccgcttatctcaggtatagaccgattatgatgacctcctttgcttttattgcc
ggggctatacctcttatgtttgcaagtggagccggagctaacagcagaatgatcatcgga
accaccgtggttatgggaatgacctttgcaacgttgtttggggttttctttatacctctt
ttttattacgtggtggtaaaattaagagagagattttctaaaataacgggaagaaaatga
DBGET
integrated database retrieval system
