Thermomonas carbonis: H9L16_13580
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Entry
H9L16_13580 CDS
T06786
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tcn
Thermomonas carbonis
Pathway
tcn01501
beta-Lactam resistance
tcn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L16_13580
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L16_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcn03036
]
H9L16_13580
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcn02000
]
H9L16_13580
01504 Antimicrobial resistance genes [BR:
tcn01504
]
H9L16_13580
Chromosome and associated proteins [BR:
tcn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H9L16_13580
Transporters [BR:
tcn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H9L16_13580
Antimicrobial resistance genes [BR:
tcn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L16_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
CzcB_C
BSH_CusB
RND-MFP_C
Biotin_lipoyl
Beta-barrel_YknX
Beta-barrel_RND
HH_EMRA
HH_YBHG
HH_MFP_RND
BSH_YknX
NQRA_N
DUF2254
DUF6692
BSH_Fcp1
DUF7077
Motif
Other DBs
NCBI-ProteinID:
QNN69677
UniProt:
A0A7G9SPA2
LinkDB
All DBs
Position
complement(2921196..2922341)
Genome browser
AA seq
381 aa
AA seq
DB search
MHDIAPAPASRHGRSLPIARLATLALVLALAACKGEGGPGKDGNGEADANKPPEAVPVEV
ARAARRPIAASYNGTAALEARGEAQVVAKTSGIALQVLVDVGQQVRAGQVLVRIDRDRAT
LQVAQADAQVRKLEANYRRAMQLAEQKMVSANDVDQLRFDLENARASLRLAKLELGYGTV
TAPISGVIATREIKPGNFVQINTPIFSIVDTSRLEATLNVPEREFETLKAGQAVQLSADA
LPGKTFEGRIDRVSPVVDSGSGTFRVISTFDGGGMLQPGMFGRVRISYDQRANALVIPRN
ALLEDGNEPTVYTIMDDKAVRSVLKLGYSEGQWVEVRQGLKEGDAVVVAGKSALREGSAV
KVLDAAAPAAKSDATAGQAAK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatcgccccggcccccgcctcccgccacggccgctcacttccgatcgcccgt
ctcgccaccttggcgctggtccttgccctggcggcctgcaagggcgaaggtggccccggc
aaggacggcaacggcgaggccgatgccaacaagccaccggaagcagtgccggtcgaagtc
gcccgcgcggcgcggcggccgatcgccgccagctacaacggcaccgcggcgctggaagcg
cgtggcgaggcccaggtggtcgccaagacctcgggcattgcccttcaggtgctggtcgat
gtcggccagcaggtccgcgctggccaggtgctggtgcgcatcgaccgcgaccgcgccacc
ttgcaggtcgcgcaggcggatgcgcaggtgcgcaagctggaagcgaactatcgccgcgcc
atgcagctggccgagcagaagatggtcagcgccaacgatgtcgaccagttgcgcttcgac
ctggagaacgcgcgcgccagcctgcgcctggccaaactggaactgggctacggcacggtg
accgcgccgatttccggggtgatcgccacccgcgagatcaagccgggcaacttcgtgcag
atcaacacgccgatcttcagcatcgtcgacacctcgcggctggaagccaccctcaacgtg
ccggagcgcgagttcgaaaccctgaaggccggccaggccgtgcagctgagcgcggatgcg
ctgcccggcaagaccttcgagggccgcatcgaccgggtctcgccggtggtcgattccggc
agcggcacgttccgggtcatctccaccttcgacggcggtggcatgctgcaacccggcatg
ttcggccgtgtgcgcatcagctatgaccagcgcgccaatgcgctggtgatcccgcgcaat
gcattgctcgaggacggcaatgaacccacggtctacaccatcatggatgacaaggcggtg
cgcagcgtgctcaagctgggctacagcgagggccagtgggtcgaagtgcgccagggcctg
aaggaaggcgacgcggtggtcgtggccggcaagtcggcgctgcgcgaaggcagtgcggtg
aaggttctggacgcggctgcgcccgcggcgaagtccgacgcaactgcggggcaggccgcg
aaatga
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