Pseudoduganella chitinolytica: PX653_00200
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Entry
PX653_00200 CDS
T08857
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct01501
beta-Lactam resistance
tct01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PX653_00200
01503 Cationic antimicrobial peptide (CAMP) resistance
PX653_00200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tct02000
]
PX653_00200
01504 Antimicrobial resistance genes [BR:
tct01504
]
PX653_00200
Transporters [BR:
tct02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PX653_00200
Antimicrobial resistance genes [BR:
tct01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PX653_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WEF33253
LinkDB
All DBs
Position
complement(43874..47020)
Genome browser
AA seq
1048 aa
AA seq
DB search
MPKFFIDRPVFAWVIALFILLGGALAITVLPVAQYPTIAPPSIVVTANYPGATAQVLDDA
VTSVIEQEMNGADGLQYVESQSDASGGVTITVTFQPGTNPDLAAVDVQNRIKRVESRLPQ
AVTQQGVQVNKARSNILMFVGLYSTDGRMDPTAIGDYMARNVVNEIKRIPGVGQAQLFGT
ERALRVWVDPDKLTGLKLNMSDVTAAIRAQNAQVTSGTIGDLPNPASQAYAAPVVVTGQL
TSVEQFRKVVLRANPDGSTVRLGDVARLEMGGASYNISARLSGQPFVAIAVQQSLTGNAL
ATATLVKAKMEELSKFFPPGLKYTVPYDTSTFVKISIEEVVKTLLEAVLLVFIVMYVFLQ
NLRYTIIPTIVVPIALMGTFAVMQLAGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM
SEEGLSPRDATKKAMSQITGAIVGITLVLIAVFVPMAFFGGAVGAIYRQFSLSMVAAMAF
SALMALTLTPALCATMLKPVEAGHHIEKRGFFGWFNRGFARTATGYQGMIARILTRTGRF
MLIFVALLAIVAWLYVKLPSSFLPNEDQGYIITNVQLPPGASRPRAEAVLAKVDAYFRQQ
PEVARTIAVAGFSFSGNGQNAGLVFVPLKDWDERGKGHSADDLAQRAMGALSGIPDAVVF
PLSPPPIRELGNATGITARLQDRSAQGHDALVAARNQLLGMAAKSDVLRGLRPEGMEDAP
QLQVDIDREKANALGVTFADINSTLSAGLGSSYVNDFNAANRQQRVIVQADQKSRMQPDD
ILRLHVRSSGGGMVPFASFATTKWINGPVQLVRYNGYPAIKLTGDAAPGRSTGEAMEELE
RLAAQLPPGFGIEWTGQSLEERTSGSQAPALFALSLLAAFLVLAALYESESIPIAVLLVV
PLGVLGALLGAHLRDLPNDVYFKVGLIAIIGLSAKNAILIIEFAKDLQAQGMGLIEATLE
AVHLRFRPIIMTSLAFILGVLPLVLASGAGSASQRAIGTGVMGGMITATVLAVFMVPVFF
VVIRRIFKGSERQRRLAAHELDMPETKA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaattcttcatcgaccgccccgtgttcgcgtgggtgatcgccctcttcatcctg
ctgggtggggcgctggcgatcaccgtgctgccggtggcgcagtacccgaccatcgctccg
ccgtcgatcgtcgtcacggccaactaccccggcgccaccgcgcaggtgctggacgacgcc
gtcaccagcgtcatcgagcaggaaatgaatggcgcggacggcctgcagtacgtggagtcg
cagagcgacgccagcggtggcgtgacgatcaccgtcaccttccagcccgggaccaacccg
gacctggccgccgtggacgtgcagaaccgcatcaagcgggtcgaatcgcgcctgccgcag
gccgtcacgcagcagggcgtgcaggtcaacaaggcgcgctccaacatcctgatgttcgtc
ggcctgtattccaccgacggccgcatggacccgaccgcgatcggcgactacatggcgcgc
aacgtcgtcaacgagatcaagcgcattcccggcgtgggccaggcgcagctgttcggcacc
gagcgcgcgctgcgggtgtgggtcgatccggacaagctgacgggcctgaagctgaacatg
agcgacgtcaccgccgcgatccgcgcgcagaacgcgcaggtcacctccggcacgatcggc
gacctgcccaatcccgcctcgcaggcgtatgcggccccggtcgtggtgacgggccagctg
acgtccgtcgagcagttccgcaaggtcgtgctgcgcgccaacccggatggctccacggtg
cgcctgggcgacgtggcgcgcctggagatgggcggcgccagctacaacatcagcgcgcgc
ctgtccggccagcccttcgtggcgatcgccgtgcagcagtcgctgacgggcaacgcgctg
gccacggccaccctggtgaaagccaagatggaggagctgtcgaagttcttcccgcccggc
ctgaagtacacggtgccgtacgatacgtccaccttcgtcaagatctccatcgaggaagtg
gtcaagacgctgctggaagcggtcctgctggtgttcatcgtcatgtacgtgttcctgcag
aacctgcgctacacgatcatcccgacgatcgtcgtgccgatcgcgctgatgggcaccttc
gccgtcatgcagctggccggcttctcgatcaacgtgctgacgatgttcggcatggtgctg
gcgatcggcatcctggtcgacgacgccatcgtggtggtggaaaacgtcgagcgcatcatg
agcgaggaaggcctgtcgccgcgcgatgcgacgaagaaggcgatgtcgcagatcaccggc
gccatcgtcggcatcacgctggtgctgatcgccgtgttcgtgccgatggcgttcttcggc
ggcgccgtgggggcgatctaccgccagttctcgctgtcgatggtggccgcgatggccttc
tcggcgctgatggcgctgaccctgacgccggccctgtgcgcgacgatgctcaaacccgtc
gaggcgggccaccatatcgaaaaacgcggcttcttcggctggttcaaccgcggcttcgcc
aggaccgcgacgggctaccagggcatgatcgcccgcatcctgacgcgcacgggacgcttc
atgctgatcttcgtcgcgttgctggcgatcgtggcgtggctgtacgtgaaactgccgtcg
tcattcctgccgaacgaggaccagggctacatcatcaccaacgtgcagttgccgccgggg
gcctcgcgcccgcgcgccgaagccgtgctggccaaggtggacgcctacttccgccagcag
ccggaagtggcgcgcaccatcgcggtggcgggcttctcgttctccggcaacggccagaac
gcgggcctcgtgttcgtgccgttgaaggactgggacgagcggggcaagggccactcggcc
gacgacctggcgcagcgggcgatgggcgccctgtccggcatccccgatgcggtggtgttc
ccgctgtcgccaccaccgatccgcgagctgggcaacgccaccggcatcacggcgcgcctg
caggaccgcagcgcgcagggccacgatgcgctggtcgccgcgcgcaaccagctgctgggc
atggccgcgaaaagtgacgtgctgcgcggcctgcggccggaaggcatggaagatgcgccc
cagctgcaggtggacatcgaccgcgagaaggccaatgcgctgggtgtcacgtttgccgac
atcaacagcacgctgtcggccggcctgggttcatcctacgtcaacgatttcaacgcggcc
aaccggcagcagcgtgtgatcgtgcaggccgaccagaagagccgcatgcagccggacgac
attttgcgcctgcacgtacgcagcagtggcggcggcatggtgccgttcgcgtcgttcgcg
acgaccaagtggatcaacggtcccgtgcagctggtgcgctacaacggctaccccgccatc
aagctgacgggcgatgcggcgccgggccgcagcacgggcgaggcgatggaggaactggaa
cggctggccgcgcagctgccgccgggcttcggcatcgaatggacgggccagtcgctggaa
gagcgcacgtccggctcgcaggccccggccctgttcgcactgtcgctgctggcggcattc
ctcgtgctggcggcactgtacgagagcgaatcgatcccgatcgccgtgctgctggtggtg
ccgctgggggtgctgggcgcgctgctgggtgcgcacctgcgcgacctgccgaacgacgtc
tacttcaaggtgggcctgattgccatcatcgggctgtcggccaagaacgcgatcctgatc
atcgagttcgccaaggacctgcaggcccagggcatgggcctgatcgaagcgaccctggaa
gcggtgcacctgcgcttccgccccatcatcatgacgtcgctggcgttcatcctgggcgtg
ctgccgctggtgcttgccagcggcgcgggctcggccagccagcgcgcgatcggcacgggc
gtgatgggcgggatgatcacggccaccgtgctggccgtgttcatggtgcctgtgttcttt
gtcgtgatccgcaggatcttcaagggcagcgaacgccagcgccgcctggccgcacatgaa
ctggacatgccggagaccaaagcatga
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