Pseudoduganella chitinolytica: PX653_15105
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Entry
PX653_15105 CDS
T08857
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PX653_15105 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_15105 (nth)
Enzymes [BR:
tct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PX653_15105 (nth)
DNA repair and recombination proteins [BR:
tct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PX653_15105 (nth)
Prokaryotic type
PX653_15105 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WEF30803
LinkDB
All DBs
Position
3429141..3429788
Genome browser
AA seq
215 aa
AA seq
DB search
MNAAKRHEIFRRLREANPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT
PQAILDLGIDELTTYIQTIGLYRTKAKNVMATCRILVDQYGGEVPHDRAALESLPGVGRK
TANVVLNTAFGDPTIAVDTHIFRVSNRTGIAPGKNVDIVEQKLLKFVPKEFLQDAHHWLI
LHGRYTCVARKPQCWNCMIADLCEFKQKTPAPAVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgccacgaaatctttcgccgcctgcgcgaagccaacccccatccc
accacggaactggaatacacgacgccgttcgagctgctgatcgccgtgctgctgtcggcg
caggccaccgacgtgggcgtcaacaaggccacgcgcaagctgtacccggtggccaacacg
ccgcaggcgatcctcgacctgggcatcgacgaactgacgacctacatccagaccatcggc
ctgtaccgtaccaaggcgaagaacgtgatggccacgtgccgcatcctcgtcgaccagtac
ggcggcgaggtgccgcacgaccgcgcggcgctggagtcgctgccgggcgtgggccgcaag
acggcgaatgtggtactgaacacggcgttcggcgacccgacgatcgcggtggacacgcac
atcttccgcgtgtcgaaccgcaccggcatcgcgccgggcaagaacgtggacatcgtcgaa
cagaagctgttgaagttcgtgccgaaggagttcctgcaggacgcccaccactggctgatc
ctgcacggccgctacacctgcgtggcgcgcaagccccaatgctggaactgcatgatcgcc
gacctgtgcgaattcaagcagaagacgccggccccggcggtggtctga
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