Pseudoduganella chitinolytica: PX653_16655
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Entry
PX653_16655 CDS
T08857
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct00270
Cysteine and methionine metabolism
tct00450
Selenocompound metabolism
tct00670
One carbon pool by folate
tct01100
Metabolic pathways
tct01110
Biosynthesis of secondary metabolites
tct01230
Biosynthesis of amino acids
tct04980
Cobalamin transport and metabolism
tct04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PX653_16655 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PX653_16655 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PX653_16655 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PX653_16655 (metH)
04980 Cobalamin transport and metabolism
PX653_16655 (metH)
Enzymes [BR:
tct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
PX653_16655 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WEF31096
LinkDB
All DBs
Position
3772751..3776530
Genome browser
AA seq
1259 aa
AA seq
DB search
MTKIATRPASQTEAQLRDILSRRIMFLDGAMGTIIQQYKLDEQAYRGGPQGRFIDFAAPA
GSGARELFVKGNNELLTLTQPHVIQEIHERYLAAGADLIETNTFGATSIAQDDYHMGHLA
YEMNVEAAKLARAATAKYSSADKPRFVAGALGPTPKTASISPDVNDPAARNVTFDQLVAA
YHEQVRGLVDGGVDVLLVETIFDTLNCKAALFAIDQYFDEHPHLERLPLMISGTVTDASG
RILSGQTVPAFWNSVRHARPLTIGLNCALGAALMRPYAEELSQIADTFVCIYPNAGLPNP
MSDTGFDELPADTSALLREFAEAGFINVAGGCCGTTPEHIAAIAALLADVKPRAMPHVPV
AQRLSGLEPFTIDDDSLFVNVGERTNVTGSKAFARMILNEQYDEALSVARQQVENGAQVI
DINMDEAMLDSLAAMTRFLNLIASEPDISRVPIMIDSSKWSVIEAGLKCVQGKSIVNSIS
LKEGEEEFIRQARLCRRYGAAVIVMAFDEKGQADTYERKIEICARAYQVLTETVGFPAED
IIFDPNIFAIATGIEEHNNYAVDFINATRWIKDNLPHAKISGGVSNVSFSFRGNDPAREA
IHTVFLYHAIKAGMTMGIVNAGMVGVYDDLPAELRERVEDVVLNRRDDATERMIEIAGTL
KAGGKAEAANLEWRNGTVQQRLSHALVHGITQWIVEDTEEARLELLNNGGRPINVIEGPL
MDGMNVVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPYIEEEKAEEERRTGIVAKPKGKI
VIATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPASEILARAKLENADIIGLSGLITP
SLEEMAHVAKEMQRDPHFRMLKIPLLIGGATTSRAHTAVKIAHNYEGPVVYVPDASRSVS
VAQSLLTPEARDKYIEEVEHDYARIREQHASKKALPTVTLATARANKMKLEFAPVKPKFV
GRRLFRNVDLALLAQYIDWGPFFQTWDLAGPYPAILTDDVVGEAATKVFAEGQALLKRII
DGRWLTANGAVALLPANSVNDDDIEVYTDDTRSEVAFTYYGLRQQGVKPVIDGVQRPNQC
LADFIAPKSSGVKDYLGMFAVTAGLGIEKYEKRFEDAHDDYSSIMLKALADRLAEAFAEY
LHERVRKDLWGYAADETLSNAALINEEYRGIRPAPGYPACPEHTVKADLFRVLQAEEIGM
ELTESFAMFPGAAVAGFYFAHPQSKYFTVGKIGEDQLNDMVARRGVDKVTLERWLAPNL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatcgcgacccgccccgcctcccaaaccgaagcgcaactgcgcgacatcctg
tcgcgccgcatcatgttcctcgatggcgcgatgggcacgatcatccagcagtacaagctg
gacgagcaggcgtaccggggcggtccgcaagggcgcttcatcgatttcgcggcgcccgcc
ggcagcggcgcacgcgagctgttcgtgaaggggaacaacgagttgctgaccctgacgcag
ccacacgtgatccaggagatccacgagcgctacctggccgccggcgccgacctgatcgaa
accaacacgttcggcgccaccagcatcgcgcaggacgactaccacatgggccacctggcc
tacgagatgaacgtcgaggcggcgaagctggcgcgcgccgcgacggccaagtacagcagc
gcggacaagccgcgcttcgtggccggcgcgctgggcccgacgccgaagaccgcgtcgatc
tcgccggacgtgaacgaccccgccgcccgcaacgtcacgttcgaccagctggtcgcggcc
taccacgagcaggtgcgcgggctggtggatggcggcgtcgacgtgctgctggtcgaaacg
atcttcgacacgctcaactgcaaggccgccctgttcgccatcgaccagtacttcgacgag
catccccacctcgagcgcctgccgctgatgatctccggcaccgtgaccgacgcgtccggc
cgcatcctgtccggccagacggtgccggcgttctggaactccgtgcgccatgcgcggccg
ctgaccatcggcctcaattgcgcgctgggcgcggcgttgatgcgcccgtacgccgaggag
ctgtcgcagatcgccgatacgttcgtctgcatctatccgaacgcgggcctgcccaacccg
atgagcgacacgggcttcgacgaactgccggccgacacctccgcgctgctgcgcgaattc
gccgaggcgggcttcatcaacgtggccgggggctgctgcggcacgacgcccgagcacatc
gccgccatcgccgcactgctcgcggacgtcaagccgcgcgccatgccgcacgtgccagtc
gcgcagcgcctgtccggcctggagccgttcacgatcgacgacgactcgctgttcgtcaac
gtgggcgaacgcaccaacgtgacgggctcgaaggcctttgcccgcatgatcctcaacgag
cagtacgacgaggcgctgtcggtggcgcgccagcaggtggaaaacggcgcccaggtcatc
gacatcaacatggacgaggcgatgctggactcgctggcggcgatgacgcgcttcctgaac
ctgatcgcgtccgagccggacatctcgcgcgtgccgatcatgatcgactcgtccaagtgg
tccgtcatcgaggcgggcctgaagtgcgtgcagggcaagtcgatcgtcaattcgatctcg
ctgaaggaaggcgaagaggagttcatccgccaggcacgcctgtgccgccgctacggcgcc
gccgtcatcgtcatggccttcgacgagaagggccaggccgacacctacgagcgcaagatc
gagatctgcgcgcgcgcctaccaggtgctgaccgaaaccgtgggcttccccgccgaggac
atcatcttcgacccgaacatcttcgcgatcgccaccggcatcgaggagcacaacaactac
gcggtggacttcatcaatgccacgcgctggatcaaggacaacctgccgcacgcgaagatc
tccggcggcgtgtcgaacgtgtcgttctcgttccgcggcaacgatccggcgcgcgaggcg
atccacacggtgttcctgtaccacgccatcaaggccggcatgacgatggggatcgtcaac
gcgggcatggtgggcgtctacgacgacctgccggccgagctgcgcgagcgcgtcgaggac
gtggtgctgaaccgccgcgacgacgccaccgagcgcatgatcgaaatcgccggcacgctg
aaggcgggcggcaaggcggaagcggccaacctggagtggcgcaacggcacggtgcagcag
cgcctctcgcacgcgctggtgcacggcatcacgcagtggatcgtcgaggacacggaagag
gcgcgactggaattgctgaacaacggcgggcgccccatcaacgtcatcgaaggaccgctg
atggacggcatgaacgtcgtcggcgacctgttcggccagggcaagatgttcctgccgcag
gtggtcaagtcggcccgcgtcatgaagcaggccgtggcccacctgatcccgtacatcgag
gaagagaaggcggaagaggaacgccgcaccggcatcgtggcgaaaccgaagggcaagatc
gtcatcgctaccgtcaagggcgacgtgcacgacatcggcaagaacatcgtctccgtcgtc
ctgcagtgtaacaacttcgaagtggtgaacatgggcgtgatggtgcccgcttccgaaatc
ctggcgcgcgccaagctggagaacgccgacatcatcggcctgtccggcctcatcacgcct
tcgctggaagagatggcgcacgtggccaaggaaatgcagcgcgacccgcacttccgcatg
ctgaagatcccgctgctgatcggcggcgccaccaccagccgcgcccacacggccgtcaag
atcgcccacaactacgaaggtcccgtcgtctacgtgccggacgcgtcgcgctccgtctcg
gtggcgcaatcgctgctgacgccggaagcgcgcgacaagtacatcgaggaagtggagcat
gactacgcgcgcatccgcgagcaacatgcgagcaagaaggcgctgcccaccgtcacgctg
gccaccgcgcgcgccaacaagatgaagctcgagttcgcgccggtgaagccgaagttcgtc
ggccgccgcctgttccgcaacgtcgacctcgcgctcctggcgcagtacatcgactggggt
ccgttcttccagacctgggacctggccggcccctaccccgccatcctgaccgacgacgtg
gtgggcgaagcggcgaccaaggtgttcgcggaaggccaggcgctgctgaagcgcatcatc
gacggccgctggctgacggccaacggcgccgtcgcgctgctgcccgccaacagcgtcaac
gacgacgacatcgaggtctacacggacgacacccgcagcgaagtggcgttcacctactac
ggcctgcgccagcaaggcgtgaagcccgtcatcgacggcgtgcagcggcccaaccagtgc
ctggccgacttcatcgcgcccaagtcttccggcgtgaaggactatctcggcatgtttgcc
gtgacggcgggcctgggcatcgagaagtacgagaagcgtttcgaggacgcgcacgacgac
tactcgtcgatcatgctcaaggccttggcggaccgcctggccgaggcgttcgccgagtac
ctgcacgaacgcgtgcgcaaggacttgtggggctatgcggccgacgagacgctgtccaat
gcagcattgatcaacgaagagtaccgcggcatccgcccggcgccgggctatccggcctgc
ccggagcacacggtcaaggcggacctgttccgcgtgctgcaggccgaggagatcggcatg
gagctgaccgaatcgtttgcgatgttcccgggggcggcggtagccggcttctacttcgcg
cacccgcagtcgaagtacttcacggtcggcaagatcggcgaggaccagctgaacgacatg
gtcgcgcggcgcggggtggacaaggtgacgctggagcgttggctggcgccgaatttataa
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