Hydrogenovibrio crunogenus: Tcr_0454
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Entry
Tcr_0454 CDS
T00296
Name
(GenBank) Efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx01501
beta-Lactam resistance
tcx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Tcr_0454
01503 Cationic antimicrobial peptide (CAMP) resistance
Tcr_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcx03036
]
Tcr_0454
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcx02000
]
Tcr_0454
01504 Antimicrobial resistance genes [BR:
tcx01504
]
Tcr_0454
Chromosome and associated proteins [BR:
tcx03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Tcr_0454
Transporters [BR:
tcx02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Tcr_0454
Antimicrobial resistance genes [BR:
tcx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Tcr_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
BSH_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
BSH_YknX
CzcB_C
HH_YBHG
HH_EMRA
BSH_CusB
Biotin_lipoyl
BSH_LcnD
Peptidase_M23
HH_CzcB
T7SS_signal
PYNP_C
Tox-REase-5
Motif
Other DBs
NCBI-ProteinID:
ABB41050
UniProt:
Q31IH3
LinkDB
All DBs
Position
508730..509851
Genome browser
AA seq
373 aa
AA seq
DB search
MKTMSKLMLTSSLIAMIGLSGCGQDAAQETSETNGIQQTIKAPVETVSLGTIPLKAVVPG
AVVPDQKAQIASRLMGYIKNFEVKVGQEVEKGDLLFSIDSSDVNSQILKAKSAYQQAQAA
LKDAKLDYDRFSKLYKDDSVSKQQFDKVSLQYKVAQENLVAAKTNLNQARSQLNYANVKA
PFDGVVVDKMAVAGGLAAPGNPVLVLENLTSLSVKTQVAEDLFAVLRLGDEAEVMIDGQP
ESIKGTIYTLVSAADPKTRTHTVKLSLPSMVSVNSGTFARVGFKRGERQTMMVPKTAVLN
RSGIEGVFVVEEGKAYFHMVRLGEEIGNKVEIKAGLNLGDHIVVDNNTSLLNGDKVDVID
SESSESTVQKGAA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatgtcaaaactgatgctaacaagtagtttgattgcgatgattggcttgtct
ggttgtggccaagacgccgcacaggaaacaagtgaaacaaacggtattcagcaaaccatt
aaagcgccagttgaaacagttagtttgggcacaattcctttgaaagcggtggttccaggt
gctgtggtgcctgatcagaaggcgcaaattgcgtcacgtttaatgggttatattaagaac
tttgaggtcaaggtcgggcaggaagttgaaaaaggggatttactgttttcaattgattcc
agtgatgtcaacagtcagattttaaaggcaaaatctgcttatcaacaggctcaggcggcg
ctaaaagatgccaagttggattacgatcgtttttcgaaactgtataaagacgattcggtt
tctaagcagcagttcgataaagtcagtttgcaatataaagtggcacaagagaatcttgtg
gctgcgaaaaccaacctgaatcaagcaagatctcagttaaattatgctaacgttaaggcg
ccttttgatggagttgtcgtcgataagatggcggttgcggggggactggctgcacctgga
aatccggtgctggttttagaaaatttaacgtctttaagtgttaagactcaggttgcggaa
gatttatttgcggtgttgcgcctaggagatgaagctgaagttatgattgatggtcaaccg
gaatcgattaaaggcacgatttacacgttggtcagtgcggcggaccctaaaactcgaacg
cataccgttaaattgagcttgccctcaatggtaagcgtgaacagtggaacgtttgctcgt
gttgggtttaaacggggtgaaagacaaacgatgatggttccaaaaactgcggtattgaac
cgttcaggtattgaaggcgtttttgtcgtcgaagagggtaaagcctattttcatatggtg
cgtttaggcgaagaaattggcaataaagttgaaattaaagccggtttgaacctaggggat
catatcgttgttgataacaatacgagtttgttaaatggtgacaaagtcgatgtgattgat
tcggaaagttctgaaagtacggtacagaaaggggctgcctaa
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