KEGG   Hydrogenovibrio crunogenus: Tcr_1030
Entry
Tcr_1030          CDS       T00296                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
tcx  Hydrogenovibrio crunogenus
Pathway
tcx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tcr_1030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcx03400]
    Tcr_1030
Enzymes [BR:tcx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tcr_1030
DNA repair and recombination proteins [BR:tcx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Tcr_1030
 Prokaryotic type
     Tcr_1030
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: ABB41625
UniProt: Q31GU8
LinkDB
Position
complement(1106063..1106695)
AA seq 210 aa
MNKQKRLEIFQRLSEAIPEPETELNYSTPFELLIAVILSAQATDKGVNIATDKLFPVANT
PEAIYALGEEGLKEYIKTIGLFNTKGANIIKTCKMLIDLHNSQVPDNRKDLEALPGVGRK
TANVVLNTAFGHPTMAVDTHIFRVSNRTKLAPGKNVLEVEQKLLKNVPKEYIIPAHHLLI
LHGRYTCTARKPRCGACCIYDLCEYKEKTA
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaataaacaaaaacgcttagaaatttttcaacgcttatcagaagccattccagaaccg
gaaacagaactgaattacagcacgcctttcgagctgcttattgctgtgatcttatcggca
caggccacagataaaggtgtcaatattgccaccgacaaattgtttccggtcgccaataca
ccggaagccatctatgcgttaggcgaagaaggactgaaagaatacattaaaaccattggg
ctgtttaataccaaaggcgccaacattatcaaaacctgcaaaatgctgattgatttgcac
aactctcaggtgcccgataatcgaaaagacctagaagctttaccaggtgttggtcgtaaa
accgccaatgtcgttttgaacaccgcctttggtcaccccactatggcagtcgacactcat
atttttcgggtatcgaaccgcaccaagctcgcgccgggcaaaaatgtcttagaagtcgaa
caaaagcttttgaaaaacgtaccgaaagaatacattattccagcccatcacttactgatt
ctccatggacgctacacttgtaccgctcgtaaacctagatgtggtgcttgttgcatttac
gatttatgtgaatacaaagagaagacggcttaa

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