Hydrogenovibrio crunogenus: Tcr_2000
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Entry
Tcr_2000 CDS
T00296
Name
(GenBank) Resistance-Nodulation-Cell Division (RND) superfamily cation efflux transporter
KO
K18138
multidrug efflux pump
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx01501
beta-Lactam resistance
tcx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Tcr_2000
01503 Cationic antimicrobial peptide (CAMP) resistance
Tcr_2000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcx02000
]
Tcr_2000
01504 Antimicrobial resistance genes [BR:
tcx01504
]
Tcr_2000
Transporters [BR:
tcx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Tcr_2000
Antimicrobial resistance genes [BR:
tcx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Tcr_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABB42590
UniProt:
Q31E33
LinkDB
All DBs
Position
complement(2200757..2203843)
Genome browser
AA seq
1028 aa
AA seq
DB search
MWLSDTSIKRPVLATVASLLLVAFGLMAFDRMSLREYPNVDPPVISIETTYLGASAEVVE
SRITKQIEDRIAGVSGIEYISSQSTDGRSNITVEFSINRDIDAAANDIRDRVSRIANNLP
VAADAPVIEKADGDDSPIIWFNLASDRMTIPELTDFAERYIVDRFSVLDGVARVRVGGGQ
SFALRVWLNPQKLALYGLSPTQIENQIRASNIELPVGSLQGDDVMLTLQAEKPLQSVDDF
KQLVIKQDKQIGQITLGDVAQVQMGAIERRRFFKGNGMPMVGIGIIKQSNANTLTVADLA
NQRKDLINQTLPDNLNLEDSYDASVFVHQAVNEVFKTLFIALGLVVLVMLVFLKNVRAAL
VPAVTLPVSLIATFWVLWMLGFSVNLLTLLALVLAIGLVVDDAIVVLENTQRHLDMGNKP
IAAAYLGTRQVGFAVIATTVVLVAVFLPIGFLEGSVGRLFSEFAITLAVAVLFSSWVALT
LSPALASNILSASKTTPASRPRKHHPTHRFKKLLVKNLRHPIWVVLIFLGVVASMVFFSQ
KVPQEYVPKEDRGVFFVMVKGPEGATFDYMQSYMNEIESRLMPLVEKGEVKRLIVRAPRS
FGSGEVFNSGFVIVVLDDWAQRRSGFDIMRSVRKDLADLSGVKAFPVMRSSIGGRIQKPV
QFVIGGPSYNALEQWKELMDQAIEKTNPGLNSLDWDYEPSKPQLRLKVDYARARALGISH
QDITETLQILLGSKKVTTFQYDGEEYDILLKADPKWFKTPDDLNQIYLNADGTEQMIPLS
SLVSMSEDATASSLNRYNRVRAITLSAKLEDHLSLGQALSYLNDLTRKTLPEEATIDYKG
QSKEFQTATSSLYWVFLFGGLVVFLVLAAQFESFIQPFVIMLTVPLAFAGGIFALLFYGL
SLNIYSQIALIMLLGLATKNGILIVEFTNQLRDKGLPVYHALVSATHLRLRPIVMTAFTT
CAGTIPLIFSEGAGAETRQILGYVLLWGVAFSTLLSLFVVPVAYALVAKNTGSPQAKTDA
LKRALSES
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgtctgatacgtcgataaaacgcccggttttagcgaccgtagcgtctttgctg
ttggtggcctttggtttgatggcttttgatcgcatgagtttgcgtgaatacccaaacgtt
gatccgcctgtcatttcaatagaaacgacctatttaggcgcttctgcggaggtagttgaa
agtcggataaccaagcagattgaggaccgaattgcaggggtttcagggattgagtatatc
tcttctcagtccacagatggacgatcgaacattaccgtggagttcagcattaatcgagat
attgatgccgcggccaatgatatccgagaccgagtttcccgtattgccaataacttgcct
gtcgcggccgatgcaccggtgattgaaaaagcggatggcgatgacagtcccatcatttgg
tttaatctggccagtgatcgtatgaccattccggagctgaccgattttgccgaacggtat
attgtggatcgtttttctgtgctggacggggtggctcgtgtacgggtcggcgggggacaa
tcgtttgcactgcgtgtttggctcaacccgcaaaaacttgcactttacggcctttcgccc
acccagattgaaaatcagattcgtgcttcaaacattgagttgcctgtggggtctctccaa
ggtgatgatgtgatgttgacgctgcaggcagaaaagccgcttcaaagcgttgacgatttt
aaacaactggtcatcaagcaagataaacaaattggccaaatcaccttgggggatgtggcc
caagtacagatgggggcgatagaacgccgccgtttctttaagggtaatggcatgccgatg
gtcgggattggcatcatcaagcagtctaatgccaataccttgacggtggcagatctggcg
aatcaacgtaaggatttgattaaccaaacgttgccagataatttgaatttagaagacagt
tatgatgcatctgtttttgttcatcaagcagtgaatgaagtctttaagaccctgtttatc
gcattaggtttagtcgtattggtgatgctggtgtttttgaaaaacgttcgtgcggcttta
gtgccagctgtcacattgccggtttcgttaatcgccactttttgggtattgtggatgtta
ggcttttcggtcaatttgttgacccttttggccttggtgctggccattggattggtggtg
gacgatgccatagtggtgcttgaaaacacacaacgacatttagacatggggaataaaccg
attgccgccgcgtaccttggcacccggcaagtcgggtttgccgtcattgcgaccacggtg
gtgttggtcgctgtttttttaccgattgggtttctagaaggtagcgtggggcggctgttc
tcagagtttgccattaccttagccgtggcggtgcttttttccagctgggtggctttaact
ttgtctcctgcgctggcttccaatattctatcggcctctaaaacaacgcctgcaagccgc
cctcgaaaacatcatccaacgcatagatttaaaaagttactggttaaaaatttacgtcac
ccgatttgggttgtgttaatttttttgggtgtggtggcctccatggttttcttttcacag
aaagtcccgcaagagtatgtgccaaaagaagatcgaggtgttttctttgtgatggtcaaa
gggcccgaaggggcaacatttgattacatgcaaagttatatgaatgaaattgaaagtcga
ttgatgccgttagtggaaaaaggtgaagtgaagcgtttgattgttagagcgccgcgctca
ttcggatccggtgaggtgtttaattcaggctttgtcattgtggtgctagacgattgggcg
cagcgacgatccggttttgacatcatgcgttcggttcgaaaagatctagcagacctttcc
ggtgtgaaagcctttcctgtgatgcggtcaagtatcggggggcgtattcaaaaaccggtg
cagtttgtgataggcgggccgagttataacgcattggaacagtggaaagaattgatggat
caagcgattgagaaaaccaatccggggctaaatagtttggattgggattatgaacccagt
aagccacaactcagacttaaggtggattatgccagagctcgcgcgttggggatttctcat
caagacattacggaaacgctgcagattttacttggctcaaaaaaagtgactacgtttcaa
tatgacggggaagaatatgacattcttctcaaagccgatcccaaatggtttaagacacca
gatgacctgaaccaaatttatctcaatgcggatgggactgaacagatgattcctttgtcg
agtctggtttcgatgagcgaagatgctacggcgtccagtctgaatcgttataaccgagta
cgcgccattaccctatccgctaaactagaagatcacctatcgttaggccaggctttaagc
tatttgaacgatttgacgcgaaagacgcttcctgaagaagccaccattgattacaaagga
cagtccaaagaatttcagacggcgaccagttcgctttactgggtctttttatttggcgga
ttggtggtctttttggtgttggcagcacaatttgaaagctttattcagccgtttgtgatt
atgttgacggttccgttggcgtttgcagggggcatttttgctttgttgttttatggcttg
agtcttaatatttacagtcagatcgcattgattatgttgcttggtttagcgactaaaaat
gggattttaatcgttgaattcacaaaccaattacgggataaagggttgccggtttaccat
gctttggtgtcggccacacacttgcgattacgaccgattgtgatgacggcatttacgacc
tgtgcaggaaccattccgttgatattttctgagggagcgggggctgaaactcgtcaaatt
ttagggtatgtgttgttgtggggcgtggcgttttcaacactgttgagtttgtttgtggtg
ccggtggcttatgcgttggtggcaaaaaataccggttcaccacaagctaaaacagatgcc
cttaagcgggcattgtctgagtcatga
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