Trachymyrmex cornetzi: 108759508
Help
Entry
108759508 CDS
T11212
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108759508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcz03041
]
108759508
Spliceosome [BR:
tcz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108759508
Complex C
U5 SnRNP specific factors
108759508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
Ras
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108759508
NCBI-ProteinID:
XP_018360491
UniProt:
A0A151JA94
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDTEDRERSDEEMEEDKDESREQVEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKAKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHSITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTSGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHAIQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
SDTENPGFVSPAVGNVCFGSSEYNVCFTLKSFAALYARNYPGLNANEFAKRLWGDIYFNP
KTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMN
IRPLLRLVCTRFLGDMCGLVDMCVTHVPSPQAHAPAKVQHVYTGPIDSPLAQDMINCDPD
GRLMIHSTKMYPTEDCTLFVVLGRIMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLW
ISEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNSEELHIFRPLKFNTQSVIKIA
VEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEI
DIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVRITWNK
KRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQ
WGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPY
LFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHT
QGQAFCQSVFHHWQIVPGDPLDKSINMRPLEPQPATHLAREFMLKTRRRKGLSEDVSINK
FFDDPMLLELARQDVLLNYPL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggatttatatgacgaatttggaaattatattggtcctgatctggcgtcagaa
agtgaagatgaaaatgaatatggcaatgttggtgatgataccgaggatagagaacggtcg
gatgaagaaatggaagaagacaaggatgagtcacgagaacaagtagaacaaggatcttct
atggcagttgtattgcatgaagataaacgatattatcccagtgcattagaggtgtatgga
cctgaggtagaaacgcttgtacaagaggaagatgcccaaccactagataaaccactaata
gcacctactagaaaagcaaagtttcaaataaaacaacaacagctgcctgaaaccacatat
agcattgaatttttagcagatatgatggatgcaccacatcttattagaaatgtagttttg
ctgggacatcttcatcatggcaaaactactttggtcgattgtttggtacaacaaacacat
ccttatttacacagtataaccgacgagaaaccactaagatatacggatacattatttact
gaacaacaaagaggcgtctccacaaaagctactcctgtcactcttttgttacaagatgtt
aaatctaaatcatatcttttaaacatatttgatacatctggccatgtgaatttttctgac
gaagcaacagctgcaatcagactgtccgatggtgcgatattaatcgttgatgcagcagag
ggagtgatgctgaacactgaacgcctgctgaagcatgcaattcaagaaaagcttgctttg
acagtttgcataaacaagatagatcgtttgatattggaattaaaactaccacccttagat
gcttactacaaattacggcatattattgaagagatcaatggattaatagcgttgtactct
tcagacactgagaatcctggctttgtgtcacctgctgtaggaaatgtttgttttggtagt
tctgaatataatgtatgctttactttgaaatcgtttgccgcactctatgctaggaactat
cctggacttaatgccaacgaattcgctaaacggctctggggtgatatttattttaatcct
aagacacggaagtttactaagaaaccacctcataatactgcacagcgaagttttattgag
tttatcctagaacctctgtataagatatttgcacaagtcgtcggtgatgtagacacaaca
ttacctgatgttctggacgaactcggtatacgattaacatccgaggaaatgaagatgaat
atacgaccgttactgagacttgtctgtacacgattcttaggcgatatgtgcggattagtg
gacatgtgtgtcactcatgtaccaagcccgcaagcacatgcacctgctaaagtacagcac
gtctatactggtccgatagattcgcctcttgcgcaggatatgattaattgtgatcctgac
ggaagattgatgatccatagtacaaaaatgtatccaactgaagattgcaccttatttgta
gttcttggtagaataatgtctggtacattggaagcaggacaacgtgttcgcgtattaggc
gaagcgtattcacgcacagacgaagaagattcgcgtgttctgacagtaggcagattgtgg
attagtgaggcgcgttactcaattgagttaagtcgcgtgcctgcgggtaattgggttctc
atagagggtattgatcggccgatcgtaaaaactagcactatcacggatctcaacaactct
gaagagttgcacatctttcggccgctcaagtttaacacacaaagcgttatcaaaattgcc
gtcgaaccggtgaatccatccgagttaccaaagatgttggatggtttgcgaaaagtaaat
aagagctatccactgctcggtacgcgagtggaggaaagtggcgagcacgttgtgctagga
actggcgaactttatctcgactgcgcgatgcatgatctacgtcgtatgtattctgagatt
gatataaaggtagccgatccggtagtcgccttcgcagaaaccgtcgtagaaaccagttcc
ctcaaatgctttgccgaaacaccaaataaacgaaataaattgacaatgatagcggaaccg
cttgaaaggggtcttgctgaagacatagaagccgaacatgtccgtattacatggaacaaa
aagagactaggagaatttttccaaacgaaatacgattgggatttattagcagcgcgaagc
atatgggcatttggtcctgactctacaggacctaacattttggtggacgacacattgcct
tctgaagtagataaaacattattgaacagcgcccgcgatgctatcatacaaggcttccaa
tggggaactcgtgaaggcccgttatgtgaagaacctatccggaatgtgaaattcaaaatc
cttgatgcagtcattgcgcaagagccattgcatagaggaggtggtcaaatcattcctact
gctcgacgtgttgcatattcagcttttctcatggcgactccacgactgatggaaccatat
ctgtttgtcgaggtacaagcacccgcggattgcgtgtccgctgtttatactgttctagcg
aaacggcgaggtcacgtaacgcaagatgccccagtcccaggcagtcctttgtatataatc
aaagccttcataccagcaatcgacagttttggctttgaaacggatttacgaacgcacact
caaggccaagcgttttgccaatctgtttttcatcattggcagattgtacctggagatcct
ctggataagagcattaacatgagaccattagaaccacaaccagccactcatttggccaga
gaatttatgctgaaaacgcgaagacgcaagggattatccgaggacgtatccatcaacaag
ttcttcgatgatcctatgttgctcgaattagcccggcaggatgtattgctaaattatccc
ctctaa
DBGET
integrated database retrieval system
