Trachymyrmex cornetzi: 108761163
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Entry
108761163 CDS
T11212
Name
(RefSeq) dosage compensation regulator isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcz03041
]
108761163
03012 Translation factors [BR:
tcz03012
]
108761163
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108761163
5.6.2.6 RNA 3'-5' helicase
108761163
Spliceosome [BR:
tcz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108761163
Translation factors [BR:
tcz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108761163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
Dicer_dimer
HA2_N
nSTAND3
AAA_19
ATPase
AAA_14
HA2_C
NACHT
Motif
Other DBs
NCBI-GeneID:
108761163
NCBI-ProteinID:
XP_018363059
UniProt:
A0A195E515
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MGDIKSFFHQWCAKNGKEPQFDVRPTGPKHRQRFLCELRIPGFDYVGAGNSTNKKDAQGN
AARDYVNYLVRTNRVNSSDVPKDAGIPTMTPDAIKNEGVSTPIKSVFQGGMGPNDIGQAY
RPYNERGQSNYTYMDRLADQKKVEDAEDVDVNSGIHGNWTIENAKSKLHQFMQTNKINAD
YKYTPVGPDHTRSFMAEMSLYIKQLGRTITGRETGSNKQTASKSCALSIVRQLYHLGVIE
AFSGTLKKNKDTEQMRPYPVKISPELESQIHDVLTSLDIKPIDIKQSSVATEDDNTTTSK
DEKDTSTTGVSLLTNQVLDDFISSVPQPAGVVSWSPPQPNWNPWTGCNIDEGPLATTSLD
QLSEDLMNEQREKLQQDSNLQASTKERSTLPVFNKKSEIMNAINENPIIIIRGNTGCGKT
TQVCQFILDDYIASGQGAYCSIVVTQPRRISAVSVADRVAAERCEALGQSVGYSVRFESY
LPRPYASIMFCTIGVLLRKLEGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLYPDLR
IILMSATIDTTLFSEYFNKCPVVEIPGRAYPVQQYFLEDCIQLTNFFPPTNSGKRKSKES
DDLPIPDAEPEENLNKVIGNNYSVETKNAMGQLTEKEISFELIEALLMYVKRQDIPGAVL
IFLPGWNLIFALMKHLQQHSLFGGSSYLIIPLHSQLPREDQRKVFDPVPSFVTKIILSTN
IAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCF
HLCSKARFNKMDEHMTPEMFRTPLHELALSIKLLRLGNIGQFLSKAIEPPPIDAVIEAEV
VLREMKCLDKNDELTPLGKILARLPIEPRLGKMMILGCMFRVGDALSTMAANSTTFPEVY
NMGPDVKRLTAQQKWFAGARFSDHVAMFHAFQAWEEARTGGEWAEQTFCDSKSLSLPTLR
ITWEAKNQLQALLQSAGFPEETLCPMPLNYQAGADPRLDTITALLCMGLYPNVCYHKEKR
KVLTTESKAALIHKTSVNCSNFEQNFPFPFFVFGEKIRTRAVSCKQMTMVSPIHLLLFGS
RKVEYVDGVIKLDNWINLDMDPQHAAAIVALRPALESLVVRASKDPETILELSPTEEKIL
SVIKALCSMNACRHELEPITGGGFQSARPPRGHVTGFRGNFNTPPKLMRGGAGYRGPVSN
NESYGGNSSGFNDNHSGGYNRGSYNRGYTMGNSRGRGGNWNNNGNRGRYFN
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatataaaatccttcttccaccagtggtgtgcgaagaatggcaaagaaccgcaa
tttgatgttagaccgacaggaccgaagcataggcaacgtttcctctgcgaactacgaata
cctggcttcgactatgtcggtgcaggaaattcgactaacaagaaggacgcgcaaggaaat
gctgcgagagattatgtcaactatttagtacgtacaaatcgcgtgaattcaagcgatgta
cctaaagatgctgggataccgacgatgacaccggatgctattaagaacgaaggtgtttcc
acaccaataaaatcagtgtttcaaggaggcatgggaccgaatgacattggtcaagcatat
aggccgtacaatgaacgtggccaaagtaattatacgtacatggataggctggctgatcaa
aagaaagtggaagatgctgaggacgttgacgtgaactctgggatacacgggaactggacg
atagaaaatgccaagtccaagctacatcagtttatgcaaactaacaaaattaatgcagat
tacaaatatactccggtcggtccggatcatacgaggagttttatggcagaaatgtcactt
tatattaaacaacttggacgaactataactggccgtgaaactggatcaaacaaacaaaca
gcgtcaaaaagctgtgctttatctattgttcgccaactatatcatctaggtgtaattgaa
gcatttagtggtacattaaaaaagaataaggatactgaacagatgagaccttatcctgtc
aaaatttcaccggaactggagagtcagattcacgacgttttaacgagtttagatataaaa
ccaattgatattaaacagtcatcggttgcaacagaagatgataatacaactacatcgaaa
gacgaaaaagatacatcaactactggtgtatctttgctaacgaatcaagttttggacgat
ttcatatcttccgtaccgcaacctgccggtgtcgtaagctggtcaccacctcagccaaat
tggaacccatggactggatgtaatatagatgagggaccgctggcaacaacatctctggat
cagttgtcagaagatttaatgaacgaacagcgagaaaaactgcagcaggactccaatttg
caggcaagcaccaaagaaagatcaactctgcccgttttcaacaaaaaaagcgagatcatg
aatgcaattaacgaaaatccaatcattatcatacgtggaaatacgggatgtggtaagaca
acgcaggtttgccagttcattctggacgattatatcgcatccggtcaaggtgcatattgc
agtatagttgtcactcaacccagaagaatctccgctgtatccgtggctgaccgagtcgcc
gccgaaagatgcgaggctttgggacaatcagttggatattccgtgaggtttgagtcgtac
ttaccgagaccctatgccagtataatgttttgcactattggtgtactcttgagaaagcta
gagggtggccttagaggcgtatcgcacgttatagttgatgagatccatgagcgagatgtc
aattcagatttcattatggtggtgctcagagatatgatccatctctatcccgatctcaga
atcatccttatgtctgctacaattgatacaacattgttcagcgagtattttaacaagtgt
cctgtggtggagattcctggcagagcgtatcccgttcagcaatatttcttggaggactgt
atacagctgacgaatttttttccacctacaaattccgggaaacgtaaatctaaggaatca
gacgatttgccaataccggacgcagaaccagaagaaaatctgaataaagtcatcggcaat
aattattctgttgaaacaaagaacgctatgggacagctgacggagaaagagataagcttt
gagttaatagaagcgctacttatgtatgttaaaagacaggatattccaggtgctgtgctg
attttcctccctggatggaatttgatattcgcgttgatgaaacaccttcagcaacactct
ctctttggcggatcgtcttatctcattatcccactacactcgcaattaccgagagaagat
cagcgtaaagtttttgatcctgtcccgtcatttgtaacgaagattattttgtccacaaat
attgcagaaacttcaatcacgatcaacgatgtcgtctacgttatagattcttgcaaggcc
aaaatgaagttattcacttcgcacaataatatgactaattacgcaactgtttgggccagt
aaaacgaatctcgaacaacgcaagggtagagcgggtcgtgttaggcctggcttctgtttc
catctatgctcaaaagcccgattcaataagatggacgaacacatgacaccagaaatgttc
aggacgcctctgcacgaattggcgttgagtatcaagctattaagattaggcaatatcggt
caattcttatcgaaggcaattgagccgcctcccattgatgccgtgattgaagcggaagtt
gtattaagagaaatgaagtgcttggataaaaacgatgaattaacgcctcttggcaagatt
ttggcgcgtttacctatagaaccgcggttgggaaaaatgatgatcctaggatgtatgttt
cgtgtgggcgacgcgctctcgacgatggccgcaaatagtaccactttccctgaggtatac
aacatgggtccagatgtgaaaaggctgactgctcagcaaaagtggtttgccggtgctaga
tttagtgaccatgtcgcaatgtttcatgcttttcaagcatgggaagaagcgagaacaggt
ggcgaatgggcagaacagacgttctgtgattcaaagagcctgagtctaccaactttacga
attacctgggaagctaagaatcaactacaagcgctattgcaaagcgctggttttcccgag
gagactctgtgtcccatgccactaaattatcaagcgggtgcggatccgcgtctcgacacc
atcactgcgctgttgtgcatgggtctgtaccccaatgtgtgctatcataaggagaagcgg
aaagttctcaccacagaatccaaggctgcgctgattcataagacatcggtgaattgcagc
aacttcgaacaaaactttccattcccgtttttcgtgtttggtgaaaagattcgcacgaga
gctgtatcttgcaagcaaatgactatggtgtcgcctatacatctcttactgtttgggtca
cgaaaagtagaatacgtggatggcgtgattaaactggacaactggatcaacttggatatg
gatccgcaacatgcagcagctatcgttgctctgagaccagctttagaaagtcttgtagtt
agagcatccaaggatccagaaacgattctagaattgagtccgactgaagaaaagatattg
agcgtgattaaggcattatgcagcatgaatgcttgtcgtcacgaattggagccgataacc
ggtggtggttttcaatcagcgcgaccccccaggggacatgtaactggctttcgcggcaac
tttaacactcctccaaaattgatgcggggaggtgcaggttaccgcggtccagtctcaaat
aatgagtcttacggtgggaatagtagcggctttaatgataaccacagcggtggttacaac
agaggaagttacaacaggggatataccatgggcaattcacgcggtcgaggtggaaactgg
aataataatggcaatcgcggacgttactttaattaa
DBGET
integrated database retrieval system
