Teleopsis dalmanni (Malaysian stalk-eyed fly): 119679397
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Entry
119679397 CDS
T09311
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119679397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119679397
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119679397
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GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
119679397
NCBI-ProteinID:
XP_037947660
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All DBs
Position
2:complement(55633102..55641510)
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AA seq
555 aa
AA seq
DB search
MDFVQVAEDEGEEEIELPSEEDGTLLLSTLQGQFPGACGLKYRNIETKAIRGVRSNEGRL
FPPSNETGWGNVIYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKSTE
DSLRDYFESYGEVLMAQVKKDVKTGQSKGFGFIRFGSYEVQMRVLSTRHLIDGRWCEVKV
PNSKGMLHQVPCKVFVGRCTEDINAEDLRDYFSKFGEVTDVFIPKPFRAFSFVTFLDPDI
AQSLCGEDHIIKGVSVHVSNAAPKTEQNRNNNQNHNYNYNAISNAAGGLHQLNYQSGNVN
TGSRKNAYLRSQPMKGLGGDGNSNHHNMSMNANNYPMSSNSYNGSSNNGNGFNNPNNTNM
NGLIGSNGSNNRQDPNMLTYNRSGNSSYMGNSHGGNNGVWNTQSNRGPIDMPNLQALGIN
SQGPNSSSQGQNMNNPLGVGLNLNSLPMNPAIVAAALNQWSLLGNQLHNTSQDQQGGNFL
SWMAQANGPSHQGPLSGNNSIKSSSNSNNPGTNDKQNSPRNDSQQNTNVSSGNQGWSRQN
NSSVTQGPDVKPAFL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtacaagtggctgaagatgaaggagaggaagaaatagagttgccttctgaa
gaggatggaactttattgctatcgacgttacaaggtcaatttcctggtgcgtgtggtctt
aaatatagaaatatagaaacaaaagcaatacgaggagtccgttctaatgagggaagactt
tttccaccatcaaatgaaactggttggggaaatgttatatacttttgtgtttttccaaaa
gaaaacaaacgtaaaagtgatgataacttagaaaattcaacggcaaaaacaaagcgcata
gaaactcgtttacgttgtaccgacttaattgttttaggattaccatggaaatcaactgaa
gacagcttgcgcgattatttcgaatcatatggtgaagtattgatggcacaagttaagaaa
gacgttaagactggtcaatctaagggatttggtttcattagatttggttcatatgaagtt
caaatgcgtgttttatctactagacatttaattgatggtcgctggtgtgaagtaaaagtt
ccaaattctaaaggaatgttacatcaagtaccatgtaaagtctttgttggacgttgtacc
gaggatataaatgctgaagatttaagggattatttttctaagtttggggaggtcactgat
gtattcatcccaaaaccatttcgtgcattcagctttgttacatttttagatcccgatata
gctcaatcactatgcggtgaagatcacataataaaaggagtttccgtccatgtgtctaac
gcagctcctaaaactgaacaaaaccgaaataacaaccaaaatcataattataattataat
gctattagtaatgcagcaggtggtttacaccaattgaattatcaaagcggtaatgtaaat
actggtagtagaaaaaatgcttacctacgtagtcaacccatgaagggattaggaggagat
ggtaatagtaatcatcataatatgtcaatgaatgccaataactacccgatgagtagtaat
agctataatggaagtagtaataacggaaatggtttcaataaccccaataatactaatatg
aatggtttaattggaagtaatggttctaataatagacaagatccaaatatgttgacttat
aatcgtagtggtaactcaagttatatgggtaacagtcatggtggaaataatggcgtgtgg
aacacgcaatctaataggggtcctattgatatgccaaatctgcaggcacttggtataaat
tcacaaggtcccaactcatcaagtcagggtcagaatatgaataatccattaggagttggt
cttaacttaaattcattaccaatgaatcctgcaatagtagcagctgcattaaaccagtgg
agtcttttgggtaatcagttgcataacacgtcacaggatcaacagggtggaaattttttg
tcttggatggcgcaagcaaatggaccaagccatcagggacctcttagcggcaataacagt
ataaaaagttctagtaattctaataatcctggcaccaatgataaacaaaattcaccacgt
aatgattctcaacagaatacaaatgttagttctggaaatcaaggctggtctcgtcagaat
aactcaagtgtaactcaaggaccagacgtaaaacctgccttcctttga
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