Teleopsis dalmanni (Malaysian stalk-eyed fly): 119680356
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Entry
119680356 CDS
T09311
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119680356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119680356
Spliceosome [BR:
tda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119680356
Complex C
U5 SnRNP specific factors
119680356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Roc
Septin
Ras
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
119680356
NCBI-ProteinID:
XP_037949058
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All DBs
Position
2:164650260..164654211
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AA seq
974 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDDDEQSIYGQQDTQDDQDDEVMDDEEEHVDDEDKEVTAVVL
HEDKRYYPTAMEVYGPDVETIVQEEDAQPLDKPLIEPIKKLKFQIKEQELPDTTYDMEFM
ADLMDTAPLIRNVALIGHLHHGKTTFVDCLIRQTHPQFENTEERTLRYTDTLFTEQERGC
SIKATPVTLVLQDVKQKSFLVNVFDTPGHVNFSDEVTAAMRMCDGVVVFIDAAEGVMLNT
ERLLKHAVQEKMAITICINKIDRLILELKLPPQDAYFKLKHIVDEVNSLLSTYGNSEDGL
IVSPVLGNVCFASSLYGFCFTLKSFAKLYADTYEGVNYIEFAKRLWGDMYFHNKSRKFTK
KPPHNSAQRSFVEFILEPMYKLIAQVVGDVDSSLADTLAELNVRITKEEMKSNIRPLLRL
VCNRFISDFSGFVDMCVQHIRSPLDNAKRKVDHIYTGPKEGEIYKDMVQCNANGTLMVHS
AKMYPTDDCTFFQVMARVISGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVYEARYK
VELNRVPAGNWVLIEGIDQCIVKTSSIVAVNAPEDLHIFRPLKFNTQSIIKIAVEPVNPS
ELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVAFCETVVETSSLKCFAETPNKRNKITMISEPLEKGLAEDIENEVVSINWNKKRIGEFF
QVNYDWDLLAARSIWAFGPDSNGPNILVDDTLPSEVDKNLLTSVKDSIVQGFQWGTREGP
LCEEPIRNVKFKILDAVIANEALHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVQA
PADCVSAVYTVLARRRGHVTQDAPVSGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCL
SVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPML
LELARQDVLLNYPL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatttatatgatgagtttggtaattatatcggaccggacttagatagcgat
gatgacgaacaaagcatttatggacaacaagacactcaggatgatcaagatgatgaagtg
atggatgatgaagaagaacatgttgacgatgaagataaagaggtaactgcagtcgttcta
catgaagataaacgttactatccgactgcaatggaagtttacggaccagatgttgaaact
attgtgcaagaagaggatgcacaaccacttgataaacctctcattgaacctattaagaaa
cttaaatttcaaattaaagagcaagagctgcctgatactacatatgatatggaatttatg
gcagaccttatggatactgcaccactcatacgaaatgttgctttaataggtcatctgcat
catggtaaaacaacattcgtcgattgtcttatacgccaaactcatcctcaatttgaaaat
actgaagaacgcacattgcgctatacggatactttattcactgaacaggagcgtggttgc
agcattaaggccacgcctgtgacgttagtactacaagacgtgaaacagaaaagttttttg
gtcaatgtgtttgatactcctggtcatgtcaacttctctgatgaagttactgcggctatg
cgtatgtgtgacggtgtggtagtgtttattgatgcagcagagggagtcatgttaaatact
gaaagattattaaagcatgctgtgcaggaaaaaatggctattacaatttgtatcaataag
attgatcgactaatactggagttgaaactcccacctcaggatgcttactttaaattaaag
catattgtagatgaagtaaattccttacttagtacgtatggcaattctgaagatggcctt
atcgtttcaccggtactgggaaatgtttgctttgcaagttcactttacggtttttgtttt
actttaaagtcttttgctaaactttatgcagacacctacgaaggagttaactatattgag
tttgccaaacgtctgtggggtgacatgtatttccacaataaatcccgcaagttcactaaa
aaacccccacataactcagctcaacgtagttttgttgaattcatactagaaccgatgtac
aaacttattgcacaagtcgtcggcgatgtggactccagtttagcggacacactagctgaa
ctaaatgtgcgcataaccaaagaagaaatgaaatcaaatatacgtcctctgctgaggtta
gtgtgtaatcgattcatcagtgactttagtggttttgtagacatgtgcgttcaacatatt
cgctcaccattagacaacgctaaacgtaaagtagatcatatatatactggcccaaaagaa
ggtgaaatttataaagacatggtgcagtgcaatgcaaatggtactttaatggtccatagt
gcgaaaatgtacccgactgatgattgtacatttttccaagtgatggcacgagttatttct
ggaactttacatgcagggcaagaagtcagagtcctgggggaaaattatacgttacaagat
gaagaggactcacgtattttgcaagttggtagattatgggtttatgaagctcgttacaag
gttgaacttaatcgtgtaccggctggtaactgggtgttaatagaaggcatagatcagtgt
attgtgaagacatcaagcattgttgcagttaatgctccagaggacttacacatatttagg
ccacttaaatttaacacacaaagtattatcaaaatagctgtggaacctgttaatccttca
gagttaccaaaaatgttagatggtttacgtaaagtcaataaatcatatcctttattatcc
acacgtgtagaagaatcaggtgaacatgtcattttgggcactggcgaactttatttggat
tgtgtcatgcacgatttaagaaaaatgtattccgagatcgatatcaaagtggctgatcca
gtagttgcgttttgtgaaacagtggttgaaacaagttcgttgaaatgttttgcagaaaca
cccaataaaagaaataaaatcactatgatatctgaacctctggaaaaaggtttagccgag
gatattgaaaatgaggtggtttctataaactggaataaaaaacgcataggtgaatttttt
caagtcaattacgattgggatttattggcagcgcgttctatttgggcatttggtcccgat
tcgaatggtccaaatattttagtagacgacacacttccatcagaagttgataaaaattta
ttgacatctgtcaaagattcaattgtacaaggttttcagtggggcacacgtgaaggtcca
ttatgtgaagaaccaatacgtaatgtcaaatttaaaattttggatgctgttatagctaac
gaagcacttcatcgtggtggtggtcaagttattcccactgcacgtcgtgtcgcatactca
gcttttcttatggcaacaccaagactaatggaaccttacctctttgtagaagtgcaagca
ccagctgattgtgtatccgcagtttacacagtattggccagaagaagaggtcacgtaaca
caagatgcgcctgtttctggttcaccattatataccattaaagcttttataccagcaata
gattcatttggtttcgaaaccgatttacgtacacatacacaaggtcaagcattttgctta
tccgtatttcatcattggcaaatcgtaccaggcgatcctttggataaatcaattattata
cgtccattagagccacaacaggcgtcacatttggctagagaattcatgattaaaacgagg
cgacgcaaggggctttcagaagatgtgtctattaataaattcttcgatgatcctatgttg
cttgaacttgcacgtcaagatgtgttactcaattatcctctataa
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