Triticum dicoccoides (wild emmer wheat): 119274241
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Entry
119274241 CDS
T07278
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03420
Nucleotide excision repair
tdc04120
Ubiquitin mediated proteolysis
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119274241
04120 Ubiquitin mediated proteolysis
119274241
09124 Replication and repair
03420 Nucleotide excision repair
119274241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119274241
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119274241
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
119274241
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119274241
Multi subunit type E3
SCF complex
Ring finger protein
119274241
Cul2 complex
119274241
Cul3 complex
119274241
Cul4 complex
119274241
Cul7 complex
119274241
Cul8 complex
119274241
Cul9 complex
119274241
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119274241
TCR (transcription coupled repair) factors
Cul4-CSA complex
119274241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
119274241
NCBI-ProteinID:
XP_037410805
LinkDB
All DBs
Position
3B:complement(1962384..1965058)
Genome browser
AA seq
125 aa
AA seq
DB search
MSAMETDAPDAPPPAAPAPAADAGAGSSSSSSRKPGKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccatggagacggacgcccccgacgcgccgccgccggccgccccggcccccgcc
gccgacgccggcgccgggtcttcgtcctcgtcgtcccgcaagccgggcaagcgcttcgag
atcaagaagtggaacgccgtcgcgctctgggcgtgggacatcgtggtggacaactgcgcc
atctgccgtaaccacatcatggatctatgcatcgagtgccaggccaaccaggccagcgcc
accagcgaggaatgcaccgtcgcatggggtgtctgtaatcatgctttccacttccactgc
atcagcaggtggctcaagactcgccaagtgtgcccactagacaacagcgaatgggagttc
cagaaatacggccactag
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