Triticum dicoccoides (wild emmer wheat): 119276154
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Entry
119276154 CDS
T07278
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00906
Carotenoid biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
119276154
Enzymes [BR:
tdc01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
119276154
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
NAD_binding_9
FAD_binding_2
Thi4
Amino_oxidase
Pyr_redox_3
Trp_halogenase
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-GeneID:
119276154
NCBI-ProteinID:
XP_037413044
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Position
3B:391378796..391382902
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AA seq
536 aa
AA seq
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MESTGAAISAPFGCRALRWAGQRPLRPADARRRRVGPGPGPEQWRSLKASCVATEKPDEK
AAPGLGVDFADEEDYVKGGGGELLYVQMQATKAMESQSKIASKLLPIADETSVLDLVIIG
CGPAGLSLAAESAKKGLTVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDTVVYLD
RNKPIMIGRAYGRVDRDLLHEELLRRCNEAGVTYLNSKVEQIKESPDGHRVVYCGRGRKI
LCRLAIVASGAASGKLLEYEVGGPRVCVQTAYGVEVEVERYPYDPSLMVFMDYRDCFKEK
FTHPEEANPTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRIIKVYE
EEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILRNRVY
SGQYLPGSSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFESFFRLP
KWMWRGFLGSTLSSADLMLFALYMFAIAPNTLRMNLVRHLLSDPTGSAMIRTYLTL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaccggcgctgccatctcggcgccgttcggctgccgcgcgttgcgctgggcc
gggcagcggcctctccggccggccgatgccaggagaaggcgggtgggtccgggccccggg
ccggagcagtggaggagcttgaaggcgagctgtgtggccacggagaagcccgacgagaag
gcggcgccggggctgggggtagacttcgccgacgaggaggactacgtcaagggcggcggc
ggtgagctgctctacgtgcaaatgcaggccaccaaggccatggaaagccagtccaagatc
gcctccaagctgttgcctatagctgatgaaacttcagtgcttgatttggttatcattggc
tgtggtccagccggcctatctctggctgcagaatcagcaaagaaaggactcactgttggt
ctcattggccctgatcttccattcacaaacaattacggtgtatgggaggacgaattcaaa
gatctcggcctggagagctgtattgagcatgtatggaaggatactgtcgtgtaccttgac
cgtaacaagccgataatgattggccgagcatatggccgggtggaccgagacttgctgcac
gaggagttgctgagaagatgcaatgaagctggtgttacatacctcaactcaaaggttgaa
cagataaaagaatctccagatggacatcgagtggtatattgtggaaggggccgcaagata
ctttgcaggcttgccattgttgcatctggagcagcatctggtaaacttctagagtatgag
gttggaggaccacgtgtttgtgtgcagactgcatacggtgtagaagtcgaggttgaaaga
tatccgtacgatcccagcttaatggttttcatggactacagagattgtttcaaagagaag
ttcacacaccctgaggaagccaatccaacatttctctatgccatggccatgtcatctaca
cgagttttctttgaggaaacatgcttagcttcaaaagatgcaatgccttttgatctcctt
aagaagaggttgatgtctcggttggatgcgatgggagttcgtatcataaaagtatacgag
gaggagtggtcttatattcctgttggaggatccttacctaacacagaccagaagaatctt
gcatttggtgctgcagcgagtatggtccatcctgcaactggatattcggtggtcagatct
ttgtctgaagctcctagatatgcttctgtgatatctgatatcttacgaaatcgtgtctat
tctggacaatatttgcctggaagttctgaaatgtccagtccatcaatgcttgcatgggga
acactatggcctcaagaacggaaacgtcagcgctcattcttcctctttggattggccttg
ataattcaactggataacgaaggcattcaaacattcttcgagagctttttccggttaccc
aaatggatgtggcgaggattccttggttcgacgctttcgtcagcggatctcatgctgttt
gcactctacatgtttgcaattgcgccaaacactttgcgaatgaacctcgtcagacacctc
ctctcggacccgactggttcggcaatgatcaggacctacctgaccttgtaa
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