Triticum dicoccoides (wild emmer wheat): 119290652
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Entry
119290652 CDS
T07278
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119290652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119290652
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119290652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Arf
AAA_15
ATP-synt_ab
ORC-CDC6-like
AAA_23
AAA_25
nSTAND3
AAA_24
Zeta_toxin
AAA_28
Motif
Other DBs
NCBI-GeneID:
119290652
NCBI-ProteinID:
XP_037425173
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All DBs
Position
4B:422973249..422976535
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AA seq
311 aa
AA seq
DB search
MAPTVEIRNLTFTYPGIDGKPPPGAPPLIEDVCFSLEAGQRCLLVGSNGAGKTTILKILG
GKHMVDPSMVGVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGYQVNIQMDISAEKMLF
GVTGVDPQRRDELIKILDVDLTWRMHKASDGQRRRVQICMGLLKPFKVLLLDEITVDLDV
LARANLLTYLKKECAEQGATIIYATHIFDGLDDWPTHIVYVAHGKLQLALPLEKVKEMSQ
LSLMRTVERWLRKERDEDRRKRKERKEKGLPAFDKVIEGSRVVNNGWAAGRLTSTIAGED
NFSFSSNSVLR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaacggtggagatcaggaatctcaccttcacctacccgggaatcgacggcaag
ccgccgcccggagcaccgcccctcatcgaggacgtctgcttctccctcgaagccggtcag
cgctgccttctcgtcggctccaacggcgcaggtaagacaacgatactgaagatactgggc
gggaagcacatggtggatccgagcatggttggggtcctgggaaggtcggccttccacgac
acggcgcttacctcctccggagacctctgctaccttggcggcgagtggaggcgcgatgtt
gcctttgccggctaccaggtgaatatacagatggacatttcggcagagaaaatgctattt
ggtgtcactggcgttgatcctcagagaagagatgagcttatcaagattttggatgttgac
cttacctggcggatgcacaaggcatcagatggtcagaggagaagagtccagatttgcatg
ggacttctcaagccattcaaggttcttcttcttgatgagataacagttgatcttgatgtg
ttggcaagagcaaatctgttgacatatctaaagaaggaatgtgcggaacaaggtgcaaca
attatctatgccacacatatcttcgatggcctggatgactggccaactcacattgtctat
gttgctcatgggaagttgcaactagcgctgccattagaaaaggtgaaagaaatgagccag
ttatcgctcatgagaacagtagagcgctggctgaggaaagagagggacgaagacaggagg
aagagaaaggagcggaaggagaaaggcctcccggcattcgacaaggtcattgaggggagc
agagtagtgaacaacgggtgggcagcaggaaggctcacttcgacgatagccggggaagat
aacttttctttcagttcaaacagcgttcttcggtag
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