Triticum dicoccoides (wild emmer wheat): 119299166
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Entry
119299166 CDS
T07278
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119299166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119299166
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119299166
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
119299166
NCBI-ProteinID:
XP_037432320
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Position
5A:complement(50214259..50216314)
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AA seq
353 aa
AA seq
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MNQFVPADWTGNMGDALPPLSGEDDGLVELLWCSGHVVMQSQAPPRPAVPEQEAAPWFQY
PVVDEDDYSVERDLFSEIFGGVPADGAGRPCKEEDKERGAADAVTALRSGVMPPPLLTDK
AGLHGDGPRDSPASEAGESSVVTMGSRRVCGGSNQAQTPHVSDTADDDSVLLPRSGREAR
DARSYHSASATLTTSSTWSRPSGASKRKQSEGPSEAMQDVESDSADVTCETAQKPTTAKR
RRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQVMWA
MGGRMTLAPAPVMFPAGAHQYMQRMAAISSRMPPFTTCVYSSNDPEMTQTLSS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgtcccggcagattggaccggtaacatgggagacgccctgccgccgtta
agcggcgaagacgacggcctcgtcgagctgctgtggtgcagcggccacgtcgtcatgcag
agccaggcgccgccaaggccggcggtgcccgagcaggaggcggcgccgtggttccagtac
cccgtcgtcgatgaagacgactactccgtcgagagggacctcttctcggagatcttcggc
ggagtgccggcggatggcgcaggcaggccgtgcaaagaggaggataaggagcgaggcgcc
gcggacgcggtgaccgcgctccgaagcggggtgatgccgccgccgctgctgacggataaa
gcagggttgcacggcgacggcccgcgcgactcgccggcgtcagaggccggcgagtcctcg
gtggtcacgatgggttccaggagggtctgcggcgggagcaaccaggcccagacgccccac
gtctcggataccgctgacgacgacagcgtgctgctgccgcggagcggcagggaagccagg
gacgctaggtcctaccacagcgcgtcggcgacgttgaccacgtcgtcgacgtggtcgagg
ccttccggcgccagcaagcggaagcagagcgagggccccagtgaggctatgcaggacgtg
gagtcggactccgccgacgtgacgtgcgagacggcgcagaagccgactacagccaaacgg
cggcgcgccgcccaagtgcacaacctctcggagaggaggagaagggacaggatcaacgag
aagatgagggccctgcaagaactcgtaccccactgcaacaaaacggacaaggcgtcgatg
ttggacgaggcgatcgagtacctcaaatcgctgcagctgcagctgcaggtgatgtgggct
atgggcggccgcatgacgctggcgccggcgccggtgatgttcccggcgggcgcccaccag
tacatgcagcggatggccgccattagttcccggatgccgccattcacgacctgcgtatac
agttcaaatgacccagaaatgacccagacactttcttcgtga
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