Triticum dicoccoides (wild emmer wheat): 119302979
Help
Entry
119302979 CDS
T07278
Name
(RefSeq) nuclear pore complex protein GP210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119302979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119302979
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119302979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Big_2
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_8th
SPATA6
Motif
Other DBs
NCBI-GeneID:
119302979
NCBI-ProteinID:
XP_037435946
LinkDB
All DBs
Position
5A:576820673..576837314
Genome browser
AA seq
1929 aa
AA seq
DB search
MADLSVLLPPRMTRPVEYRLVGGDGCFTWSLDHHDIISVKPEYNDSSRCSTSARLASIAP
YSGRKETSVYATDIISGITIHCKVFVDKISRIRIFHHSVKIDLDEIATLRVHAFDDEENV
FSTLVGLQFMWQLTPTTLDNSNHHLAHIPLKETHLSDCSGFCVEMNARFELEDRDLGSDF
FVVKGVGIGQEVVSAQLFEPQFEHVSDTITLTVAEAMSLEPPSPVLVTLGVLVNFKLKIF
RQKIAQVVNLPSQYHLWHVKNSSVAQVDSSLGVVHTLSLGFTDVVVEDTRVSGHQQVSSL
RVVIPRTLFLYLVPVMDDSGHFHGITSIPSSEVWYVFPGQKYMVLAKAFAEGFDAREIFI
TEENNLRLESSTVELWNLSQVPDNSLGSYEVQTSRLLFPISQGEGYLVAALTYQAEASGS
AKVLKLLQKVNVCSKVKATWDEGTDNSNIIYLPWVPGVYQEVELMAVGGCGKTPEDYKLF
SSDESVVSVSDSHTVRAKKPGQAVIKVVSTFDFLNFDEIIIEVSSPSALAILPIFPVEVA
VGTQLHAAVAFKTSNGHPYSRCDYFNAFIRWSLLSENQTFEVVDASEALTVEALKHHSGS
SAQYGNPCAWISLNASAAGRATIVATFSSESDSYFETFNEPIFLKATSKVSAYYPLLVLQ
AGNGNQFGGYWVDLSRLQSGIQNMGNNSPMELYLVPGSTMDVFLFGGPEQWDKVVDFVET
VDVVGALENYIIGSTAVQKISSGLYRVSCQSKGIFKLLFSRGNMIGKDHPVPAVAKSELS
IVCDLPSAVTLIANENENRLDILEAASKADRSPNRLQVSPVVISNGRSIRLAAAGVHQNG
RFFSNSSSLCLRWEVTECEGLAYLDQDEDAEMLEQSSWERFLVLHNSTGMCTARATVIGF
SSRIASKTREEHMFLPSEHDNLTDAIQLQIVSSLRVTPAYVLLVSHREAQETLAVSGGTC
FLDASTNDTHVVQIVQHPGKALCSQLILGARGLGSAVVTIQDIGLSPRVSTSSLVRVANV
DWIQILSEEHISIMEGTTKDFQISAGTQDGQVFGDSQYKYMGIEVHLGDEILDHVNPSES
LDGPKFSVKAAKTGTTSLYVSTKQRSGQRVLSQVINVEVYKPLRIHPEYIYLTPGASFVL
SVKGGPKIGVSIEYTSLNVGTLEVQSATGKLSAKTVGNSTVRAAVLANGGTVICEAFGRV
EVGIPVAMALSTQSDRLCVGCSMPVYPSVPKGDPFSFYETCQSYTWMIADQKVVTFQSAR
SWQNGLDQGLYSEGKTYPWLSNGSSNAFINHVIGRSAGKTKISISVTCDFSLHGSSGSVS
YDASKTILVVPDPPLARGLPITWLLPPFSTTTDLLPRSVNSFGEQDSNGLDTTIGYSLLR
SSGRSDPAMQNANAIDGSKIRTGESNAIDCIQAKDHSTGRTEIASCLRVAEVAQVRVAAA
ESSIQTAYLSVNDKVELDVKYADELGYTFSEALGVAPVKIETNYPDVLSIVMPRDVNGTD
GAHQRFVLQARSHGTALVRLHINHPSRKSDFIMVSVGARMYPRDVVIHSGQHLNFTIIGD
RMDARGPGQWLSTNEKVMHVNQITGEAHARGEGIAEVIFKGPNLKLRTTVNVLKVNQIVV
DAPAEILTNAAAPPDGYKFSVKLSDSAGHSTESSVNQINAPFDCKVEPSFVGFVEPWSDR
AVKKSYCVFHPYSPAQLLPVKSNPKDGILHISVLANLKEDSMVTGSAHALFVKGFYIKEP
GMLNLTPSCNHSVIIIGGNTDVELFWSAKDLMSVSLVDTNENIGGPSQVVYRVEALKRQP
FADKVTIILPATGQTEELEVNYVTGDRTEPSSSSGLTTFGLILTCIIVPAGTLWVIMKLL
EKPARQAPPRHAPAPAAGPAAAPDPASPAIGEFSPRTPQPFMEYVRKTVDDTPYYKRDAR
RRFNPQNTY
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcagcgtgctgctgcccccgcgcatgaccaggcccgtcgagtaccgactc
gtcggcggggacggctgcttcacctggtcattggatcatcatgatattatatcagttaag
ccagagtacaacgacagcagcagatgctcaacgagcgctcgtttggcatcaatcgcccct
tacagtggccgcaaggagacctctgtctacgccactgatattattagtggaatcacaata
cactgcaaagttttcgtcgacaaaatctctcggatcaggattttccatcattctgttaaa
attgacctggatgaaatcgccacattgcgtgttcatgcctttgatgatgaagaaaacgtg
ttctcgacattggtgggattgcagtttatgtggcagcttaccccgacgacgcttgataac
agtaaccatcatcttgctcatattccactgaaagaaacacatttaagtgactgcagtggt
ttttgtgttgagatgaatgcgcggtttgagcttgaagatagggatcttggttctgatttc
tttgttgtgaagggtgttgggattggccaagaggtcgttagtgctcagttatttgaacca
cagtttgagcatgtgagtgacacgatcactttaactgtcgctgaagctatgtcgctagag
cccccatcacccgtccttgtaactcttggtgtcttggtgaatttcaaactcaaaattttt
cgacaaaagattgcccaagtggttaatttaccatcacaataccatctttggcatgtgaag
aactcttcggtggcccaagtggatagttccttgggtgttgtacatactttgagtctggga
tttactgatgtcgttgttgaagacacaagagtttctggccaccaacaagtatcatctcta
cgtgttgttattccacggacactcttcctctatctagttcctgtcatggatgattctggt
cattttcatgggataacaagtattccatcctcagaagtgtggtacgtttttcctggtcaa
aagtatatggttcttgcgaaagctttcgcagagggatttgatgctagagagatatttatt
acagaggaaaacaatcttagattggagagcagcacagtggaactttggaacttatcacag
gttccagataactctttaggttcctatgaagtgcaaacttctagattgctattccccatt
tctcagggagaaggatatttagttgctgccttaacctaccaagcagaggcatctggatca
gcaaaggttctcaagctgctgcaaaaagttaatgtatgcagtaaagtgaaggcaacctgg
gatgagggaacggataactccaatattatttatctaccctgggttcctggagtttatcag
gaggtcgaactgatggcagttggaggttgtggtaagacgccggaggactacaagttattt
tcgtctgatgaaagtgttgtttctgtgtctgattcccatactgtgcgtgctaaaaagcct
ggtcaagctgtcatcaaagtagtttctacctttgatttcctgaattttgatgagatcatt
attgaagtatcctctccttcagcactggctatattgccaatctttcctgtggaggtggct
gttggaacacaacttcatgctgctgtggcatttaaaacatctaatggacacccgtactcg
agatgtgattattttaatgcttttataaggtggagtctactatctgagaatcaaactttt
gaagttgttgatgcatccgaggctttgactgttgaggccttaaagcatcatagtggttct
tcggcacaatatggcaatccttgtgcctggatatctctaaatgcatctgctgctggtcga
gccacaatagttgcgacgttttcctccgagtctgattcctattttgagacttttaatgag
cctatttttctgaaggccacatcaaaagtatctgcatattatcctcttctggtactccaa
gcaggaaatggaaaccagtttggtggttactgggttgacttatctagattacagagtgga
attcagaatatgggtaacaactctcccatggagctgtacttggttcctggatcaaccatg
gatgtgtttctctttggagggcctgaacagtgggacaaagtggttgattttgtagaaact
gttgatgttgttggcgcactagaaaattatatcattggctctactgctgtgcaaaaaata
tctagtggactataccgagtttcttgccaaagcaaagggatctttaaactgttgttttcg
cgcggaaacatgattgggaaggatcatcctgtgcctgctgttgccaaatcagagctatcg
attgtttgtgacttaccatcagcagtaacattgattgcaaatgaaaatgaaaaccggctt
gatattttggaagcggcaagtaaagctgaccgtagccccaataggctgcaagtatctcct
gttgtaatctcaaatggaagaagcatccgtctagctgctgctggtgtacatcaaaatgga
agatttttttccaattcgtcctctctttgcttgagatgggaagtcactgaatgtgaggga
cttgcttacttggatcaagacgaagatgctgaaatgttagaacagtcatcttgggagagg
tttcttgtcctacacaattcgacgggaatgtgcactgcccgtgctacagtcattggcttt
tcttccagaattgctagcaaaacccgtgaagaacacatgtttcttccaagtgaacatgac
aatctcacagatgctattcagttgcagattgtttcttcgttaagagtcactccagcgtat
gtcttgttagtttcccatcgtgaagcacaggaaaccttagctgtcagtggtggcacgtgc
tttctagatgcctctaccaatgacacacatgtggtccaaatagttcaacatccagggaag
gccctatgttcccagttgattcttggtgctagaggcttaggcagtgctgtcgtgacaatt
caggacattggcctttctcctagagtatcgactagttctctggttagagttgcaaatgtt
gactggattcagatattgtcagaagagcacatcagcattatggaaggaaccacaaaagat
tttcaaatttcagctgggacccaagatggacaagtcttcggagattctcagtacaagtac
atgggaattgaggtacatcttggtgatgaaattctggatcatgttaatccaagcgagtcg
ctggatggaccaaaattttcagttaaagctgcaaaaactgggacaacatctctttatgtt
agtactaagcaacgctctgggcaaagagttttgagtcaggttataaatgtggaagtgtac
aaaccactgcgaatacatcctgagtacatctacctcacaccgggtgcctcttttgtgctc
tctgttaaaggtggtccgaagattggagtttccattgagtacacaagtttgaacgtggga
acgttggaagttcaaagtgctactggaaagctgtctgcaaagactgtaggaaactctact
gtacgtgcagctgttttggcaaatggtggcaccgtcatttgtgaagcttttggaagagtt
gaagtgggtatcccagtggctatggcattgagtactcaaagtgaccgcctttgtgttggc
tgtagcatgccagtctacccttccgtgcctaagggggatccattttccttctatgaaact
tgtcaaagttacacttggatgatagcagatcagaaggttgtgacattccaatcggctaga
tcttggcaaaatggacttgatcaaggtctttattcagaaggaaaaacctatccatggtta
tccaatggaagtagcaatgcttttatcaatcatgtgattggaagatctgcagggaaaacc
aagatatccatttcagttacttgtgatttctcgctacatggcagttctggatctgtatct
tatgatgcctccaagacaatcctggtcgtaccagatcccccccttgcacgtggacttcct
ataacatggctattaccacccttttctaccaccacagaccttttacctagatccgttaat
tcatttggagaacaagactcaaatggcctggatactactattggatattctctgttaagg
agcagtggtagaagtgatcctgctatgcagaatgctaatgctattgatggaagtaaaatt
aggactggagaaagcaatgcaattgattgtattcaggcaaaagatcactcaactggcaga
acagaaatagcatcatgcctacgagttgctgaggttgcacaagtacgggtagctgctgca
gaatcatcaatccagacagcctatctttctgtaaatgataaagttgaactggatgtaaaa
tatgctgatgaattaggttatacctttagtgaagcacttggagtagcacctgtgaagatt
gagacaaactatcctgatgttttgtcaattgtcatgcccagagatgtcaatggtacagat
ggcgcacatcaacgttttgtgctacaggcgagaagccatgggacagctcttgtaaggttg
cacatcaaccatccttccagaaaatcagatttcataatggtatctgttggtgcgcgaatg
tatcctagagatgtggtgattcattctggccaacacctgaactttactattatcggggac
cgcatggatgcgcgtggacctggccagtggttaagtaccaatgaaaaagttatgcatgtt
aatcaaataactggtgaagcacatgcacgtggtgaaggtatagcagaagtgatttttaaa
ggcccaaatctgaagttgcgaacaactgtcaatgtgctcaaggtgaaccagatagttgtt
gatgctcctgcggagattctgacgaatgctgctgccccacctgatggatacaagttctct
gtgaaattaagtgattcagccgggcatagcacagagtcctctgtgaatcagataaatgcc
ccatttgactgcaaggtcgaaccttcttttgttgggtttgttgagccatggagtgaccgt
gctgtgaagaaatcatactgtgtatttcatccgtactcgcctgcacagctgttgcctgtt
aagtcgaacccaaaagacggaattttacacatttcagttcttgcaaatctaaaagaagat
tcaatggtgaccggatctgcacatgcactgtttgtcaaagggttttacattaaagaacct
ggaatgttaaacttgactccaagctgcaaccatagcgtcatcattattggagggaacact
gatgttgagttattttggagtgctaaagatttaatgtcggtcagtcttgttgacacaaat
gagaacattggtggtcctagtcaagttgtttaccgggttgaagcactcaaaaggcaacct
ttcgctgacaaggtcactataattcttccagccactggccagactgaagaattagaagtt
aattatgttacaggagacagaacagagccatcgtcgtcgtcaggcttaaccacatttggt
cttatcctcacatgcatcatcgtgccagcaggtacactctgggtcatcatgaagctgctg
gagaaaccggcccgacaggcaccaccacggcacgcgccggcaccagcagcggggcccgcc
gctgcgcctgaccctgcctccccggctatcggcgagttctctcctcgcacgccccagcct
ttcatggagtacgtgaggaagactgtcgacgacacgccttactacaagcgtgacgcgagg
aggcgattcaaccctcaaaatacgtactga
DBGET
integrated database retrieval system
