Triticum dicoccoides (wild emmer wheat): 119303409
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Entry
119303409 CDS
T07278
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119303409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119303409
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119303409
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
119303409
NCBI-ProteinID:
XP_037436432
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Position
5A:614086939..614091456
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AA seq
412 aa
AA seq
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MDGNGRSAASHKKPLVADNDLVELLWHNGGVVAQPQTHPRPAPSGLAGGGGETAAWFADD
VDALGNDVYAQLWNSIAVGAAPDVACAALPGPSSHPPPPPPPPPMPSGIASSWTGGDIGS
TFCGSSLAPEVPAGGREEASAAPPSEGTRGASTRDGGAGTSSSGGSGSNFGGSGLPSESG
GHAHKRKGRGKDDSDSRSEDVECEATEETKSSRQHGSKRRSRAAEVHNQSERRRRDRINE
KMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMFPGSHQFMPPMA
VGMNSACMPAAQGLNQMARVPYMNHSLSNHIPMSPSPAMNPMYIANQMQNIQLREASNHF
LHLDGGQATAPQVAGPYAYTPQVAPKSQIPEVPDCTAVPISGPGQPPAPDGI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgggagatcggcggcgagtcacaagaagcctctcgtcgcggacaacgac
ttggtggagctgctgtggcacaacgggggcgtcgtcgcgcagccgcagacgcacccgagg
ccggcgcccagcggcctcgccggcggtggcggggagacggccgcgtggttcgcggacgac
gtcgacgcgctggggaacgacgtgtacgcgcagctctggaacagcattgcggtgggcgcc
gccccagacgtcgcgtgcgcggcgctcccggggcccagctcccaccctcccccgccgccg
ccgccgccgccgatgccgagcggcatcgcctccagctggaccggcggcgacatcggctcc
accttctgcggcagcagcctggccccggaggtgccggcggggggcagggaggaagccagc
gccgcaccgccgtcggaggggacgcgcggggccagcacgcgcgacggcggcgccggcacc
tcgtcgtccggcgggtccgggagcaacttcgggggctccggcctgccgagcgagagcggc
ggccatgcccacaagaggaagggcaggggcaaagacgactctgatagccgcagcgaggat
gtggagtgtgaggccactgaagagaccaaatcgtcgaggcagcacgggtcgaagcggagg
agcagggcagctgaagttcataaccagtcagagaggagacgaagggaccggatcaacgaa
aagatgcggtcactgcaagaactcataccccactgcaacaaggctgacaaagcatcaata
ttagatgaggcgatcgagtacttaaagtccctccaaatgcaagttcagattatgtggatg
accaccgggatggcgccaatgatgtttcctggttctcaccagttcatgccgccgatggcc
gtgggcatgaattcggcatgcatgcctgcggcacagggtctaaatcagatggcaagagtg
ccatacatgaaccattctttgtcaaatcacatccctatgagcccatctccagcaatgaac
cctatgtacattgcaaaccagatgcaaaacattcagctgagggaagcaagtaaccatttc
cttcacctagatggcgggcaagcaacggcacctcaggtagcaggaccatatgcttataca
ccacaagtagcaccgaaaagccagataccggaagtgccggactgtactgctgtgccaatt
tctgggcccggacaaccacctgcacctgatggaatttag
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