Triticum dicoccoides (wild emmer wheat): 119307410
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Entry
119307410 CDS
T07278
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119307410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119307410
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119307410
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
119307410
NCBI-ProteinID:
XP_037439384
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Position
5B:complement(66853112..66855111)
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AA seq
339 aa
AA seq
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MNQFVPADWTGNMGDALPPLSSEDDGLVELLWCSGHVVMQSQAPPRQAVPEQEAAPWFQY
PVVDEDDCSVERDLFSEIFGRMPADGAGRPCKEDDKQRSAADAVTALRSGVMPPPLLAGK
AGLHGGGPRGSPVSEAGESSVVTMAFRRPCGGSNQAQTPHVSDTARDDTVLLPRSGREAR
DARSYLSVSATLTSSSTWSRPSGTSKRKLSEVPSEVMQDVESDSADVTCETARKPTTAKR
RRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQLMWA
MGGRMALAPAPVMFPAGAHQYMQRMAAISSRMPPFTTGV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgttcctgcagattggaccggcaacatgggagacgccctgccgccatta
agcagcgaagacgacggcctcgtcgagctgctgtggtgcagcggccacgtcgtcatgcag
agccaggcgcctccaaggcaggcggtgcccgagcaggaggcggcgccgtggttccagtac
cccgtcgtcgatgaagacgactgctcggtcgagagggacctcttctcggagatcttcggc
agaatgccggcggatggcgcaggcaggccgtgcaaggaggatgataagcagcgaagcgcc
gcggacgcggtcaccgcgctccgaagcggggtgatgccgccgccgctgctggcgggtaaa
gcagggttgcacggcggcggcccgcgcggctcgcctgtctcagaggccggcgagtcctcg
gtggtcacgatggcattcaggaggccctgcggcgggagcaaccaggcccagacgccccac
gtctcggataccgcccgcgacgacaccgtgctgctgccgcggagcggcagggaggccagg
gacgctaggtcctacctcagcgtgtcggcgacgttgacctcgtcgtcgacgtggtcgagg
ccttctggcaccagcaagcggaagctgagcgaggtccccagtgaggttatgcaggacgtg
gagtcggactccgccgacgtgacgtgcgagacggcgcggaagccgacgacagccaaacgg
cggcgcgccgcccaagtgcacaacctctcggagaggaggagaagggacaggatcaacgag
aagatgagggccctgcaagaactcgtaccccactgcaacaaaacggacaaggcgtcgatg
ctggacgaggcgatcgagtacctcaaatcgctgcagctgcagctgcagctgatgtgggct
atgggcggccgcatggcgctggcgccggcgccggtgatgttcccggcgggcgcccaccag
tacatgcagcggatggccgccattagttcccggatgccgccattcacgactggcgtatag
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