Triticum dicoccoides (wild emmer wheat): 119311653
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Entry
119311653 CDS
T07278
Name
(RefSeq) nuclear pore complex protein GP210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119311653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119311653
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119311653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Big_2
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_8th
SPATA6
Motif
Other DBs
NCBI-GeneID:
119311653
NCBI-ProteinID:
XP_037443214
LinkDB
All DBs
Position
5B:565821561..565838648
Genome browser
AA seq
1929 aa
AA seq
DB search
MADLSVLLPPRMTRPVEYRLVGGDGCFTWSLDHHDIISVKPEYNDSSRCSTSARLASIAP
YSGRKETSVYATDIISGITIHCKVFVDKISRIRIFHHSVKIDLDEIATLRVHAFDDEENV
FSTLVGLQFMWQLTPTTLDNSNHHLAHIPLKETHLSDCSGFCVEMNVRFELEDRDLGSDF
FVVKGVGIGQEVVSAQLFEPQFEHVSDTITLTVAEAMSLEPPSPVLVTLGVSVNFKLKIF
RQKIAQVVNLPSQYHLWHVKNSSVAQVDSSLGVIHTLSLGFTDVVVEDTRVSGHQQVSSL
RVVIPRTLFLYLVPVMDDSGHFHGITSIPSSEVWYVFPGQKYMVLAKAFAEGFDAREIFI
TEENNLRLESSTVELWNLSQVPDNSLGSYEVQTSRLLFPISQGEGYLVAALTYKAEASGS
AKVLKLLQKVNVCSKVKATWDEGTDNSNIIHLPWVPGVYQEVELTAVGGCGKTPEDYKLF
SSDESVVSVSDSHTVRAKKPGQAVIKVVSTFDFLNFDEVIIEVSSPSALAILPIFPVEVA
VGTQLHAAVTFKTSNGHPYSRCDYFNAFIRWSLLSENQTFEVVDASEALTVEALEHHSSS
SAQYGNPCAWISLNASAAGRATIVATFSSESDSYFETFNEPIFLKATSKVSAYYPLLVLQ
AGNGNQFGGYWVDLSRLHSGIQNMGNNSPMELYLVPGSTMDVFLFGGPEQWDKVVDFVET
VDVVGALENYIIGSTAVQKISSGLYRVSCQSKGIFKLLFSRGNMIGKDHPVPAVAKSELS
IVCDLPSAVTLIANENENRLDILEAASKVDRSPNRLQVSPVVISNGRSIRLAAAGVHQNG
RFFANSSSLCLRWEVTECEGLAYLDQDEDAEMLEQSSWERFLVLQNSTGMCTARATVIGF
SSRIASKTREGHMFLPSEHDNLTDAIQLQIVSSLRVTPEYVLLVSHREAQETLAVSGGTC
FLDASTNDTHVVQIVQHPGKALCSQLILGARGLGSAVVTIQDIGLSPRVSTSSLVRVANV
DWIQILSEEHISIMEGTTKDFQISAGTQDGQVFGDSQYKYMGIEVHLGDEILDHVNPSES
LDGPKFSIKAAKTGTTSLYVSTKQRSGQRVLSQVINVEVYKPLRIHPEYIYLTPGASFVL
SVKGGPKIGVSVEYTSLNVGTLEVQSATGKLSAKTVGNSTVRAAVLANGGTVICEAFGRV
EVGIPVAMALSTQSDRLCVGCSMPIYPSVPKGDPFSFYETCQSYTWMIADQKVVTFQSAR
SWQNGLDQALYSEGKTYPWLSNGSSNAFINHVIGRSAGKTKISISVTCDFSLHGSSGSVS
YDASKTILVVPDPPLARGLPITWLLPPFYTTTDLLPRSVNSFGEPDSNGLDTTIGYSLLR
SSGRSDPAMQNANAIDGSKIRTGESNAIDCIQAKDHSTGRTEIASCLRVAEVAQVRVAAS
ESSIQTAYLSVNDKVELDVKYADELGYTFSEALGVAPVKIETNYPDVLSIVMPRDVNGTY
GTHQRFVLQARSHGTALVRLHINHPSRKSDFIMVSVGARMYPRDVVIHSGQHLNFTIIGD
RMDARGPGQWLSTNEKVMHVNQITGEAHARGEGIAEVIFKGPNLKLRTTVNVLKVNQIVV
DAPAEILTNAAAPPDGYKFSVKLSDSAGHSTESSVNQINAPFDCKVEPSFVGFVEPWSDR
AGKKSYCVFHPYSPAQLLPVKSNPKDGILHISVRANLKEDSMVTGSAHALFVKGFYIKEP
GMLTLTPSCNHSIITIGGNTDVELFWSAKDLMSVSLVDTNENIGGPSQVVYRVEALKRQP
FADKVTIILPATGQTEELEVNYVTGDRTEPSSSSGLTTFGLILTCIIVPAGTLWVIMKLL
EKPARQAPPRHAPAPAAGPSAAPDPASPAIGEFSPRTPQPFMEYVRKTVDDTPYYKRDAR
RRFNPQNTY
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcagcgtgctcctgcccccgcgcatgaccaggcccgtcgagtaccgcctc
gtcggcggggacggctgcttcacctggtcattggatcatcatgatattatatcagttaag
ccagagtacaacgacagcagcagatgctcgacaagcgctcgtttggcatcaatcgcccct
tacagcggccgcaaggagacctctgtctatgccactgatattattagtggaatcacgata
cactgcaaagttttcgtcgacaaaatctctcggatcaggattttccatcattctgttaaa
atcgacctggatgaaatcgccacattgcgtgttcatgcctttgatgacgaagaaaatgtg
ttctcgacattggtgggattgcagtttatgtggcagcttaccccgacgacgcttgataac
agtaaccatcatcttgctcatattccactgaaagaaacacatttaagtgactgcagtggt
ttttgtgttgagatgaatgtgcggtttgagcttgaagatagggatcttggttctgatttc
tttgtcgtgaagggtgttgggattggccaagaggtcgttagtgctcagttatttgaacca
cagtttgagcatgtgagtgacacaatcactttaactgtcgctgaagctatgtcgctagag
cccccatcacccgtccttgtaactcttggtgtctcggtgaatttcaaactcaagattttt
cgacaaaagattgcccaagtggttaatctaccatcacaataccatctttggcatgtgaag
aactcttcggtggcccaagtggatagttccttgggtgttatacatactttgagtctggga
tttactgatgtcgttgttgaagacacaagagtttctggccaccaacaagtatcatctcta
cgtgttgttattccacggacactcttcctctatctagttcctgttatggatgattctggt
cattttcatgggataacaagtattccatcctcagaagtatggtacgtttttcctggtcaa
aagtacatggttctcgcgaaagctttcgcagagggatttgatgctagagagatatttatt
acagaggaaaacaatcttagattggagagcagcacggtggaactatggaacttatcgcag
gttccagataactctttaggttcctatgaagtgcaaacttctaggttgctattccccatt
tctcagggagaaggatatttagttgctgccttaacctacaaagcagaggcatctggatca
gcaaaggttctcaagctgctgcaaaaagttaatgtatgcagtaaagtgaaggcaacctgg
gatgagggaacagataactccaatattattcacctaccctgggttcctggagtttatcag
gaagtcgaactgacggcagttggaggttgtggtaagacgccggaggactacaagttattt
tcgtctgatgaaagtgttgtttctgtgtctgattcccatactgtgcgtgctaaaaagcct
ggtcaagctgtcatcaaagtagtttctacctttgatttcctgaattttgatgaggtcatt
attgaagtatcctctccttcagcactggctatattgccaatctttcctgtggaggtggct
gttggaacacaacttcatgctgctgtgacatttaaaacatctaatggacacccatactcg
agatgtgattattttaatgcttttataaggtggagtctactatctgagaatcaaactttt
gaagttgttgatgcatctgaggctttgactgttgaggccttagagcatcatagtagttct
tcggcacaatatggcaatccttgtgcctggatatctctaaatgcatctgctgctggtcga
gccacaatagttgcgacgttttcctccgagtccgattcctattttgagacttttaatgag
cctatttttctgaaggccacatcaaaagtatctgcatattatcctcttctggtactccaa
gcaggaaatggaaaccagtttggtggttactgggttgacttatctagattacatagtgga
attcagaatatgggtaacaactctcccatggagctgtacttggttcctggatcaaccatg
gatgtgtttctctttggagggcctgaacagtgggacaaagtggttgattttgtcgaaact
gttgatgttgttggcgcactagaaaattatatcattggctctactgctgtgcaaaaaata
tctagtggactataccgagtttcttgccaaagcaaagggatctttaaactgttgttttca
cgtggaaacatgattgggaaggatcatcctgtgcctgctgttgccaaatcagagctatca
attgtttgtgacttaccatcagcagtaacattgattgcaaatgaaaatgaaaaccggctt
gatattttggaagcggcaagtaaagttgaccgtagccccaataggctgcaagtatctcct
gttgtaatctcaaatggaagaagcatacgtctagctgctgctggtgtacatcaaaatgga
agattttttgccaattcgtcctctctttgcttgagatgggaagtcactgaatgtgaggga
cttgcttacttggatcaagacgaagatgctgaaatgttagaacagtcatcttgggagagg
tttcttgtcctacagaattcgacgggaatgtgcactgcccgtgctacagtcattggcttt
tcttccagaattgctagcaaaacccgtgaaggacacatgtttcttccaagcgaacatgac
aatctcacagatgctattcagttgcagattgtttcttcgttaagagtcactccagagtat
gtcttgttagtttcccatcgtgaagcacaggaaaccttagctgtcagtggtggcacatgc
tttctagatgcctctaccaatgacacacatgtggtccaaatagttcaacatccagggaag
gccctatgttcccagttgattcttggtgctagaggcttgggcagtgctgtcgtgacaatt
caggacattggcctttctcctagagtatcgactagttctctggttagagttgcaaatgtt
gactggattcagatattgtcagaagagcacatcagcattatggaaggaaccacaaaagat
tttcaaatttcagctgggacccaagatggacaagtcttcggagattctcagtacaagtac
atgggaattgaggtacatcttggtgatgaaattctggatcatgttaatccaagcgagtcg
ctggatggaccaaaattttcaattaaagctgcaaaaactgggacaacgtctctttatgtt
agtactaagcaacgctctgggcaaagagttttgagtcaggttataaatgtggaagtgtac
aaaccattgcgaatacatcctgagtacatctacctcacaccgggtgcctcctttgtgctc
tctgttaaaggtggtccgaagattggagtttccgttgagtacacaagtctgaacgtggga
acgttggaagttcaaagtgctactggaaagctgtctgcaaagactgtaggaaactctact
gtacgtgcggctgttttggcaaatggaggcaccgtcatttgtgaagcttttggaagagtt
gaagtgggtatcccagtggctatggcattgagtactcaaagtgaccgtctttgtgttggc
tgtagcatgccaatctacccttccgtgcctaagggggatccattttccttctatgaaact
tgtcaaagttacacctggatgatagcagatcagaaggttgtgacattccaatcggctaga
tcttggcaaaacggacttgatcaagctctttattcagaaggaaaaacctatccatggtta
tccaatggaagtagcaatgcttttatcaatcatgtgattggaagatctgcagggaaaacc
aagatatccatttcagttacttgtgatttctcgctacatggcagttctggatctgtatct
tatgatgcctccaagacaatcctggtcgtaccagatcctccccttgcacgtggacttcct
ataacatggctattaccacccttttataccaccacagaccttttacctagatccgttaat
tcatttggagaaccagactcaaatggcctggatactactattggatattctctgttaagg
agcagtggtagaagtgaccctgctatgcagaatgctaacgctattgatggaagtaaaatt
aggactggagaaagcaatgcaattgattgtattcaggcaaaagatcactcaactggcaga
acagaaatagcatcatgcctacgagttgctgaggttgcacaagtacgggtagctgcttca
gaatcatcaatccagacagcctatctttctgtaaatgataaagttgaactggatgtaaaa
tatgctgatgaattaggttatacctttagtgaagcacttggagtagcacctgtgaagatt
gagacaaactatcctgatgttttgtcaattgtcatgcccagagatgtcaatggtacatat
ggcacacatcaacgttttgtgctacaggcgagaagccatgggacagctcttgtaaggttg
cacatcaaccatccttccagaaaatcagatttcataatggtatctgttggtgcgcgaatg
tatcctagagacgtggtgattcattctggccaacacctgaactttactattatcggggac
cgcatggatgcgcgtggacctggccagtggttaagtaccaatgaaaaagttatgcatgtt
aatcaaataactggtgaagcacatgcacgtggtgaaggtatagcagaagtgattttcaaa
ggcccaaatctgaagttgcgaacaactgtcaatgtgctcaaggtgaaccagatagttgtt
gatgctcctgcggagattctgacgaatgctgctgccccacctgatggatacaagttctct
gtgaaattaagtgattcagccgggcatagcacagagtcctctgtgaatcagataaatgcc
ccatttgactgcaaggtcgaaccttcttttgttgggtttgttgagccatggagtgaccgt
gctggaaagaaatcctactgtgtatttcatccgtactcgcctgcacagctgttgcctgtt
aagtcgaacccaaaagacggaattttacacatttcagttcgtgcaaatctaaaagaagat
tcaatggtgaccggatctgcacatgcactgtttgtcaaagggttttacattaaagaacct
ggaatgttaactttgactccaagctgcaaccatagcatcatcactattggcgggaacact
gatgttgagttattttggagtgctaaagatttaatgtcggtcagtcttgttgatacaaat
gagaacattggtggtcctagtcaagttgtttaccgggttgaagcactcaaaaggcaacct
tttgctgacaaggtcactataattcttccagccactggccagactgaagaattagaagtt
aattatgttacaggagacagaacagagccatcgtcgtcgtcaggcttaaccacatttggc
cttatcctcacatgcatcatcgtgccagcaggtacactctgggtcatcatgaagctgctg
gagaaaccggcccgacaggcaccaccacggcacgcgccggcaccagcagcggggccttcc
gctgcgcctgaccctgcctccccggctatcggcgagttctctcctcgcacaccccagcct
ttcatggagtacgtgaggaagactgtcgacgacacgccttactacaagcgtgacgcgagg
aggagattcaaccctcaaaatacgtactga
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