Triticum dicoccoides (wild emmer wheat): 119324047
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Entry
119324047 CDS
T07278
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119324047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119324047
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119324047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA
AAA_28
SMC_N
AAA_15
NACHT
AAA_23
SRP54
Rad17
PduV-EutP
AAA_18
AAA_25
AAA_24
AAA_30
Zeta_toxin
AAA_5
AAA_22
AAA_33
AAA_16
Arf
AAA_14
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
119324047
NCBI-ProteinID:
XP_037453674
LinkDB
All DBs
Position
6B:688919882..688923580
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AA seq
291 aa
AA seq
DB search
MAGGEEGWRRSGIEVSTLQFGYDGEAPLFARFNLRVAPGSRCLLVGANGSGKTTLLKILA
GKHMVGGKDVVRVLNGSAFHDTQFVCSGDLSYLGGSWSRNVSSVGDVPLQGDFSAEHMIF
GVDGVDPVRREKLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDV
VTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKKSAKYSDIEELKT
AKNLLSVVESWLKSETKLPKKEPARVESQPRRPSPFDASPFRASRHMAYYR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggcgaggaagggtggaggaggagcggcatcgaggtgagcaccctgcagttc
ggctacgacggggaggcgccgctcttcgcgcgcttcaacctccgcgtcgcccccggctcg
cgctgcctcctcgtcggcgccaacggatccggcaagaccactctcttaaagattcttgca
ggaaaacatatggttggaggaaaggatgttgtccgtgttcttaatggttctgcttttcat
gacacacagtttgtgtgcagtggtgacctttcctacttgggtggttcgtggagtcggaat
gtcagttcagttggtgatgttccactacaaggcgatttctctgctgagcacatgatattt
ggagttgatggggttgatcctgttaggcgagagaagctgattgatctactggatattgat
ctgcaatggcgcatgcataaagtttcagatggacagcgccgcagggtacaaatttgcatg
ggtcttcttcatccatacaaggtactcttactcgatgagatcaccgtggatctcgatgtc
gtgaccaggatggatctcctcgacttcttcaaggaagagtgcgagcagagggaagccacg
atcgtctacgccacgcacatattcgacggcctggagacatgggcgaccgacatcgcatac
atccaggagggcgagctgaaaaagtcggcgaaatactcggacatcgaagagctcaagacg
gccaagaacctgctgtcggtcgtggagtcatggctgaagtccgagaccaaactcccgaag
aaagagcccgcgcgcgtcgagagccagcccaggcgcccctccccgttcgacgcctcccct
ttccgagcgtcgcgccacatggcctactaccgatga
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