Triticum dicoccoides (wild emmer wheat): 119327997
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Entry
119327997 CDS
T07278
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119327997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119327997
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119327997
Complex C
U5 SnRNP specific factors
119327997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
EF-G_D2
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
119327997
NCBI-ProteinID:
XP_037456940
LinkDB
All DBs
Position
7A:complement(565652880..565658234)
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AA seq
994 aa
AA seq
DB search
MDDSLYDEFGNYIGPELADSDADDSDAAASPSPSQSRSPSPARSPSGSPNSRRPAALMDV
DDDDYADAAQNAVVLAEDKKYYPTAEEVYGPGVEALVMDEDEQALEKPIVAPPRVVKFEV
GTRAGATSTYASTDFILGLASNPLLVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEG
ERHIRFTDTRVDEQERRVSIKAVPMSLVLESGNGKSYLCNIMDTPGHVNFSDEMTAALRL
ADGAVLVVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPNDAYFKLRHT
LDTINDLISSCSTTVGGTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHEK
FASRLWGDLYYDHNSRTFKKKPPAAGANRSFIEFILEPLYKIYSQVVGEQQRILEVTLAD
LGVTLSNAAYKLNVRPLLRLACRSMFGTATGFTDMLVKNIPSVKDGAARKIEHIYTGQQD
SSIVDAMKKCDSHGPLMVNVTKLYPKPDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPDD
EEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMNMDEDVYIFR
PLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD
SIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMLAEPLEKGLAE
DIENGLVSLDSRQKEVTDFFRQRYQWDVLAARSIWAFGPDKQGPNILLDDSLSVEVDKNL
LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYS
AFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPVYVVKAFLPVI
ESFGFETDLRYHTQGQAFCVSVFDHWAIVPGDPLDKGIVLRPLEPAPIQHLAREFMVKTR
RRKGMSEDVSINKFFDEAMMNELAQQTADIHLMM
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcctctacgacgagttcggcaactacatcggcccggagctcgccgactcc
gacgccgatgactcggacgccgccgcctccccgtccccctcgcagtcccgctccccctcc
ccggcgcgctccccgtccggctcccccaactcccgccgccccgccgccctcatggacgtc
gacgacgacgactacgccgacgccgcccagaacgccgtcgtcctcgccgaggacaagaag
tactaccccacggccgaggaggtctacggcccgggcgtcgaggcgctcgtcatggacgag
gacgagcaggcgctcgagaagcccatcgtcgcgccgccccgcgtcgtcaagttcgaggtc
ggcacccgcgccggtgcgacctccacctacgcctccaccgatttcatcctcggcctcgcc
tccaacccgctgctggtccgcaatgtggcgctcgtgggccacctgcagcacgggaagacg
gtgttcatggacatgctcgtggagcagacccacgaggtggacacgttcgactccgagggc
gagcgccacatccggttcacagacacccgggtggacgagcaggagcgcagggtctccatc
aaggctgtgccgatgtcgctcgtgctagagtcagggaatggcaagtcctatctctgcaac
atcatggatacgcctggccatgtcaatttttccgacgagatgactgctgcgctcaggcta
gcggatggggctgtgcttgttgtcgatgctgctgagggcgtcatggtaaacactgagagg
gcgattcgtcatgcgatccaagaaagacttcccatcgttgttgtgattaacaaggttgac
agactgataacagagctaaagctgcccccaaatgatgcgtattttaagctacgacataca
ctggacacaatcaatgatctaatctcatcttgttctaccacagtaggtggcactcaactg
gtagacccagctgctggaaatgtttgctttgcgagtggttctgctggctggtcttttacc
ttgcaatcttttgcacatctttatttgaagattcatgggattcagtttgaccatgagaaa
tttgcatctcgtctatggggagatttgtattatgaccataactctagaaccttcaaaaag
aagccgccggcagcaggagctaataggtcattcattgagttcatccttgagcctctgtat
aaaatctatagtcaggttgttggagagcaacagagaattcttgaagtaactctcgctgac
ttgggtgtgacactgagcaatgcagcttataagcttaatgttaggcctttgctgagactt
gcttgccgctcaatgtttggcactgctactggttttaccgacatgttagtgaaaaacatc
cccagtgtgaaggatggcgctgcaaggaaaatagaacacatatacactggtcaacaagac
tcctccattgtggatgcaatgaagaaatgtgattcccatggtcctcttatggtcaatgtt
acaaaactgtatcctaagcctgactgtagtgtctttgatgcctttggacgagtttatagt
ggcacaatacagactggtcagacagttcgggtgcttggagaaggctattcccctgatgat
gaagaggatatgactgtcaaagaggtcaccaagttgtgggtctatcaggcacggtaccgt
gttccaataagtaaggcacctgctggttcttgggttcttattgaaggcgtggatgcatca
atcatgaaaactgcaaccatatgtcctatgaacatggatgaagatgtgtacatatttagg
cctctacgcttcaataccttacctgttgtaaagatagcagccgagcctcttaacccgagt
gagctgcctaaaatggtggaaggtctgcgtaaaattagcaagagctaccctcttgctatt
actaaggtagaagagtcaggcgaacacactatacttgggactggtgagctatatctagat
tctataatgaaggacctcagagagctttactctgaggtagaagtgaaggttgcagatcca
gttgtgacattttgtgaaacagttgttgatacttcctctatgaaatgttttgctgaaaca
cccaacaagaggaacaaaattaccatgttagctgaaccactagagaagggcttggcagaa
gatatagagaatggccttgtcagccttgactcaaggcagaaagaagtcaccgacttcttt
cgccaacgctaccagtgggatgtgcttgcagcaaggtcaatatgggcttttggacctgac
aagcagggtcctaacattctactagatgactctctttcggttgaggtggataagaacttg
ctgaatgcagtcaaagattcaattgttcaagggtttcagtggggtgctagagaaggcccc
ttgtgtgatgaaccaattaggaatgtgaagttcaagatcctaaatgcaaatatcgcacca
gaaccattgcaccgtggtggcggccaaataatccccacagctcgccgggttgtctactca
gcatttctgatggctaatcctcgacttatggagcctgtttattacattgagatccaaact
ccaattgactgtgtatctgctatatatacggtcctgtcgcggcgacgtggccatgtgaca
gccgatgtacccaagccaggcactccagtatatgttgtcaaggcatttttacctgtcata
gagtcttttgggtttgagacagatctcagataccatacacagggacaagcattttgtgtg
tcagtgtttgaccactgggctattgttcctggcgatcctcttgacaagggcattgttctc
cggcctttggaaccagcacctatccaacaccttgcccgtgagttcatggtaaagaccagg
cgaaggaagggcatgagcgaggatgttagcatcaacaagttctttgacgaggccatgatg
aacgagctggcgcaacagactgcagatatccacctgatgatgtag
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integrated database retrieval system
