Triticum dicoccoides (wild emmer wheat): 119364251
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Entry
119364251 CDS
T07278
Name
(RefSeq) transcription factor APG-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
tdc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119364251
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119364251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119364251
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119364251
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
119364251
NCBI-ProteinID:
XP_037485592
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All DBs
Position
1A:78205082..78207935
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AA seq
511 aa
AA seq
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MLLRRSEPGNELDELLWDNGPALRRAASPFPPFSCSPAGTMKAQELAKHPASATAMAQGH
DDDAVPWLQHYPIIGVDDGGGGDTAPLPQDYFSTLFPGFSDLPAAVAGRDAGAPSTSHAA
VVVPPLPEPPVLPKQQQQQQQQPPPPRSTGEGVMNFSFFSRPLQRSLPQASVRPSAAGSK
SVESTLLQTNRLRSTPLFSEQRTAWLQPPRESPATVAAPRPLAPPVPVQHAAEPAAALSQ
RLQPEARAAALPPRLQPEPRAAALPQRLQSEARASEMPPPPATATTSSVCSDNGERSQLK
RSSHQTLEWSVSQDDEDLDDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRAL
QELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTAGLCMPPMMAMQHMQMPPMAHF
HHHHLGAMGYGMGPFDPRLVAAAGAAQFPYQMMPGAPMFGGHAMPPPPPFHQAAVAGAHM
AAGPVSNDAATAAQAEHEQTPGDHPQVPRAM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgtaggagcgagccgggcaacgagctggacgagctgctctgggataacgga
ccggcgctccggcgggcggcgtcgcccttcccgcccttctcctgcagccccgccggcact
atgaaggcgcaggagctcgccaagcaccccgcgtcggcgacggcgatggcgcaggggcac
gacgacgacgccgtgccgtggttgcaacattaccccatcatcggcgtggacgacggcggc
ggcggcgatacggccccgctgccccaggactacttctccaccttgtttcccgggttctcc
gacctccccgctgcggtggcgggcagagatgccggagcgccatcgacgtctcacgcagcg
gtcgtcgtgccgccgctgccggagccacctgtgctccccaagcagcagcagcagcagcag
cagcagccgccgccgcctcggtccaccggcgagggcgtcatgaacttctccttcttctcg
aggcccctgcagcgctcgctgccgcaggccagcgtgagaccgtctgccgcgggaagcaag
tccgtcgagtccacgctgctgcagaccaacaggctaagaagcaccccgctgttctcggag
cagaggacggcgtggctgcagccgcccagggagtcgcccgccacggtggccgcgcctcgt
cctctggcaccgccagtgcctgtccagcatgccgcagaaccggcagcggcgttatcccag
agattgcaaccggaagcgagggctgcggcgttaccaccgagattgcaaccggaaccgagg
gctgcggcgttaccccagagattgcaatcggaggcgagggcttccgagatgccaccgccg
cccgcaacagcgacgacctcgtctgtctgctctgacaacggcgagcggagccagctgaag
aggagcagccaccagactctggagtggtcggtcagtcaggacgacgaggaccttgacgac
gaggccggcgggctgagaaggtcggcggcgaggagcaccaagcgcggccgcaccgccgaa
gtgcacaacatgtcggagaggaggagaagggatcgaatcaacgagaagatgcgcgccctg
caagaactcatccccaactgcaacaagattgacaaggcgtcgatgctggaggaggccatc
gagtacctcaagaccctgcagctccaggtgcagatgatgtcgacgatggggacggccggg
ctgtgcatgccgccgatgatggcaatgcagcacatgcagatgccgcccatggcgcacttc
caccaccaccacctcggcgccatggggtacggcatgggccccttcgacccgcgcctcgtc
gcagccgccggcgccgcgcagttcccttaccagatgatgcccggcgcgcccatgttcggc
ggccacgcgatgcctcccccgccaccgttccaccaggcggcggtggcgggcgctcacatg
gctgccggccccgtcagcaacgacgccgccacggcagcgcaggccgagcacgagcagaca
cccggcgaccatccgcaggtcccacgagcaatgtag
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