Candidatus Thiocaldithrix dubininis: QJT80_01580
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Entry
QJT80_01580 CDS
T09759
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu00300
Lysine biosynthesis
tdu00550
Peptidoglycan biosynthesis
tdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QJT80_01580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QJT80_01580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tdu01011
]
QJT80_01580
Enzymes [BR:
tdu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
QJT80_01580
Peptidoglycan biosynthesis and degradation proteins [BR:
tdu01011
]
Precursor biosynthesis
Amino acid ligase
QJT80_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WGZ91172
UniProt:
A0AA95KKA7
LinkDB
All DBs
Position
332704..334203
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AA seq
499 aa
AA seq
DB search
MTPMLLSDLLRGWVAYAPDLSITGLSLDNRNLQPGMVFVALRGTQQHGLIYALSAAAAGA
VAILYEPEENLNLPSLDIPLIPVEHLRANLGLIAARFYAKPSQALFMVGVTGTDGKTSVT
HFIAEALNAAQADSAAVIGTLGLGAPGLLQTATHTTPDAISVQKALANLQAQNFTSVAME
VSSHALDQGRVQGVEFDVAVLTNLTRDHLNYHGTVAAYAEAKRKLFHWANLKAVVLNLDD
AFGKQLAAEMAAQDLQVIGYGVGTLADYPTDSLVASDAVFDHSGIQATVHWQGQQAALTA
PVLGQFNLHNLLAALGTLLAKGIAFTQAVKLLQHVWVVPGRMERVATAKAAEKLVVVDYA
HTPGALAQVLTAVRAHTKRRLICVFGCGGDRDRGKRPLMAQTAQENADFLIITDDNPRTE
SAKQIFGDIMGGIQPNSTIPVTWEHDRAQAIRLAIQQAQAGDTVLIAGKGHETVQILADH
TVPFDDRVQAAQALKEFSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacacctatgcttttatcagacttattacgcggttgggtggcatacgcccctgatctg
agtattacgggcttaagtttagataaccgtaatctacaaccgggaatggtgtttgttgcc
ttacgcggcacgcaacaacacggcttgatttatgcgctgtcggcagcggcagccggtgca
gttgcaattctgtatgagccggaagaaaaccttaatttgcccagtttagatattccctta
attccagttgaacacttgcgggcgaatttagggctgattgcagctcggttttacgccaaa
cctagccaagcgttgtttatggtgggggttacagggacagatggtaaaacttcggtaaca
cattttattgcagaagccttaaatgctgcgcaagcggattcagcagccgttattggcaca
ttaggcttaggtgcacccggtttacttcaaaccgcaacgcataccacgccggatgcgatt
tctgtacaaaaagctttagccaacttacaagcgcaaaattttactagcgtggctatggaa
gtatcctcgcatgccttggatcaagggcgtgtgcaaggagtcgaatttgatgttgcggta
ttaaccaatctaacccgcgaccatttgaattatcacggcacggtggctgcttatgcggag
gctaaacgtaaattatttcactgggcgaatttaaaagctgtggtgttaaatttagatgat
gcgtttggtaaacaattagcggctgaaatggcggcacaagatttacaagtgattggctat
ggggtaggcacattagccgattatccaacagatagtttggtagcgagcgatgcagttttt
gaccatagcgggattcaagccacggtgcattggcaaggtcaacaagctgccttaactgcg
ccggtgctggggcaatttaatttgcataatctattggctgctttaggtacgttattagcc
aagggcattgcatttacccaagccgttaaattattacaacatgtgtgggttgtacctggt
cgtatggagcgggtggctactgcgaaagcggctgaaaaattagtggtggtagattatgcc
cataccccgggtgcattagcgcaagtgctaacggctgtgcgggcacataccaaacgccgt
ttaatttgtgtatttggctgcggtggggatcgtgatcgtggcaaacgccctttaatggcg
caaacggctcaagagaatgctgattttttaatcataaccgatgataatccccgtactgaa
tcagcaaaacaaatatttggggacattatgggcggcattcagccaaatagcacgattccc
gtaacgtgggaacatgaccgtgcgcaagcgattcgtctcgccattcaacaagcacaagcc
ggggataccgtgttaattgcaggcaaagggcatgaaaccgtgcaaatcttagccgatcac
accgtgccgtttgatgaccgtgtacaagcggcgcaagccttaaaggagttcagcctatga
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