Candidatus Thiocaldithrix dubininis: QJT80_01795
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Entry
QJT80_01795 CDS
T09759
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu01501
beta-Lactam resistance
tdu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QJT80_01795
01503 Cationic antimicrobial peptide (CAMP) resistance
QJT80_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdu03036
]
QJT80_01795
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_01795
01504 Antimicrobial resistance genes [BR:
tdu01504
]
QJT80_01795
Chromosome and associated proteins [BR:
tdu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QJT80_01795
Transporters [BR:
tdu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QJT80_01795
Antimicrobial resistance genes [BR:
tdu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QJT80_01795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
YknX_C
BSH_CzcB
HH_EMRA
BSH_CusB
HH_AAEA_pHBA
HH_YBHG
HH_AprE
TP096X_C
BSH_YknX
CzcB_C
DUF5667
Motif
Other DBs
NCBI-ProteinID:
WGZ91214
LinkDB
All DBs
Position
376901..378142
Genome browser
AA seq
413 aa
AA seq
DB search
MPRTRRRHQLLSMVCLLSTVWLSACQQEDPNAAKKAPPKEAEVGVMHLQTQDVVLTNELP
GRVVAAQTAEVRPQVSGIIQSQLFEAGSEVRKGTPLYQIDNSTYQVALETAQAQLAKAQA
NLETAITKNRRNQALVERGLISRDSYDDQATEVKQAQADVEVAKAAIKTAKINLAYSTIK
APITGYVGKSVVTPGSLVTANQATALATMQSLDPIWVDITLASTDFVSGKNAITPQVSLV
LPNGAAYSQTGHLAFTDTSVDKATGALTVRAEFDNPQRQLLPGMFVRARLETGEQKAALL
VPQQAVSRKANGDASVWLLNSSENTVNPTVVKTGQAIGNKWLINEGLSAGDQIVVDGFQK
IKPGAKVKPLPLGADGKPLKAEAPAKPATPDAVEVKVSMPATSGAPATPSQAK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaacccgtcgccgtcatcaactattgagtatggtttgcttgctaagtacggta
tggctcagtgcttgccagcaagaagatcccaatgctgcgaagaaagcgcctcccaaagaa
gccgaagtcggcgttatgcacttgcaaacccaagacgtcgtgttaaccaatgaattaccc
gggcgggtggttgctgcgcaaaccgcagaagtgcgcccgcaagtcagcggtattattcaa
agccaattattcgaggcaggttcagaagtacgcaaaggcacgccgctgtatcaaattgat
aacagtacctatcaagtggctttagaaaccgcacaagcccaattagctaaagcccaggct
aacttagaaacggccatcacgaaaaatcggcgtaatcaagcgttagttgagcgtgggtta
attagccgtgatagctacgacgaccaagcgaccgaagttaagcaagcgcaagcggatgtg
gaagtggccaaagccgccattaaaaccgctaaaattaatttagcttacagtacgattaaa
gcgccgattacgggttatgtgggtaaatcagtggttacgccgggttcgttagtgacggct
aatcaagccaccgcgttagcgaccatgcaaagccttgacccgatttgggtggatatcact
ttagccagtaccgattttgtcagcggcaaaaatgctattacgccacaagttagtttagtg
ttaccgaacggcgcggcttatagtcaaactgggcatttagcctttacggatactagcgtg
gataaagccacgggtgcattaaccgtgcgtgctgaatttgataatccacaacgccaatta
ttgccgggtatgttcgtcagagcacgtttagaaacaggcgaacaaaaagcggcgttatta
gtgccacagcaagcggtttcacgtaaagccaatggtgatgccagtgtttggttattgaat
agtagcgagaatactgtaaatcccacagtggttaaaacgggacaagcaatagggaataag
tggctgattaatgaaggtttaagcgcgggcgatcaaattgtagtcgatggtttccaaaaa
attaaacccggggcaaaagtcaaaccgttgccattaggcgcagacggtaagcccttaaaa
gcggaagcacctgctaaaccggctacgcctgacgcagttgaggtaaaggttagtatgccc
gcaacctcgggcgcacctgctactcccagtcaagccaaataa
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