Candidatus Thiocaldithrix dubininis: QJT80_05490
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Entry
QJT80_05490 CDS
T09759
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QJT80_05490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdu03400
]
QJT80_05490 (nth)
Enzymes [BR:
tdu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QJT80_05490 (nth)
DNA repair and recombination proteins [BR:
tdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QJT80_05490 (nth)
Prokaryotic type
QJT80_05490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WGZ91934
UniProt:
A0AA95KFR5
LinkDB
All DBs
Position
complement(1142843..1143475)
Genome browser
AA seq
210 aa
AA seq
DB search
MNAAQRAELFQRLSQVNPEPRTELVYHSPFELLISVILSAQATDKSVNKATAPLFAVANT
PEAIFALGEDGLKSYIKTIGLANTKAKNIIATCEKLINEHQSQVPNTREALEALPGVGRK
TANVVLNTAFRQPTMAVDTHILRVANRTGLAPGKTVLAVEKGLVHNIPAEYLLDAHHWLI
LHGRYTCTARTPKCKTCMISDLCEYPEKTA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcacaacgcgctgaactgtttcagcgcttaagtcaagtcaatcccgagccg
cgcacggaattggtctatcacagcccgtttgaactcttaatctcggttattttatcagca
caagccacggataaaagcgtcaataaagcgaccgctcctttatttgctgtagccaatacc
cccgaagccatattcgccttaggtgaagacggcttaaagtcctacatcaaaaccattggt
ttggcgaatactaaagcgaaaaatattattgccacctgcgaaaaactgattaacgaacat
caatcacaagtgccgaatacgcgagaagccttagaagccttgccgggcgtggggcgtaaa
accgctaatgtggtgctaaatacggcgtttcgccaaccgacaatggccgtggatacgcat
attttgcgggttgccaatcgtacaggactggcaccgggtaaaacggtattagcggtggaa
aaaggcttagtgcataatattccggcggaatatctgttagatgcgcaccattggttaatt
ttacacgggcgttatacttgcaccgcacgcacgccaaaatgtaaaacgtgtatgattagc
gatctatgtgaatacccggagaaaaccgcctaa
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