Candidatus Thiocaldithrix dubininis: QJT80_09255
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Entry
QJT80_09255 CDS
T09759
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu01501
beta-Lactam resistance
tdu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QJT80_09255
01503 Cationic antimicrobial peptide (CAMP) resistance
QJT80_09255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_09255
01504 Antimicrobial resistance genes [BR:
tdu01504
]
QJT80_09255
Transporters [BR:
tdu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QJT80_09255
Antimicrobial resistance genes [BR:
tdu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QJT80_09255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
WGZ89688
UniProt:
A0AA95KJ92
LinkDB
All DBs
Position
complement(1977675..1980770)
Genome browser
AA seq
1031 aa
AA seq
DB search
MNISAWSIRHPVPSILLFALLTFLGIKSFKALGIQDFPDIDLPTITVNASLEGAAPSQLE
TEVARKIENQVATLDGIEHIRTTLTNGSASTRVEFNIDKDVDVALNEVRNAVDSIKADLP
ASMTSPTVSKVTTAGSAILTFTVDAPSMTEEAVSWMIDNDVSKALLAVKGVGKVSRIGGV
TREVHVDLDPIKMQALGVTAADISNQLKLVQQDSSGGRSDIGGNIQSIRTLAAAQDTQDI
EALTIPLGDGRTVRLSDIAQVKDTVAERTNYALLDGKKVVGFEIMRSKGASAVAVADKVR
HTVANFQAQHPYLKITEAADTVEPITDNFKGSMELLYEGAFLAIIVVYLFLRDWRATLVS
AVALPLSIIPTFLVMQYLGYSLNTLTLLALALVVGILVDDAIVEIENIVRHLQMGKTPYE
AAMEAADEIGLAVIATTFSLIAVFLPTAFMPGVPGKFFEQFGITASVSVFASLMVARLLT
PMMAAYFLKPHAEEKHGDSPVKAAYLRLVNWCLHHRIITMVLTLAFFIGSVMLVPMLPKG
FVPVADSGRTSVKVELQPGSTLEETYSAAEQARKIISQVDGVIQVFSNVGTGGGTGGPMG
QSGTADVRKATLTVKLIHRNERKRKQTAIEAEMRQRLQVLPGARVSVGVGGSGEILQVTL
AGENAVLLQEASQAVERDLRTLKGIGNIKSSASLQRPELHIIPDYVKAGDLGITAGALSN
AMRLATSGDFATSLPKLNLDERQVNIRVQLDPAWRTNLDLIRNLGVKSIRGEVPLATVAS
IKMGSGPAQIDRLDRKRNITFEVELGSRIIGDVQAEVAKLPSLQNLPAGVTQPKSGEAER
MAELFSSFGNAMLVGVLLIYIVLVLLFHDFLQPLTILAALPLSFGGAFVALLITHNSFSM
PSVIGILMLMGIAAKNSILLVDYAVMAYKEHGMPLYDAVLDACRKRAQPIIMTTIAMGAG
MLPVALGLGAEPSFRSPMAIVVIGGLLTSTLLSLLVIPVIFTYVDDFEKLLKKILRYFRR
HSDHQTVKLSA
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcggcatggtcaattcgccatcctgttccgtctattttgctgtttgcatta
ctgacatttttggggattaagagttttaaagcgttaggcattcaagatttccccgatatt
gatttgcccactattacggtcaatgcttcattagaaggtgcagcacccagccagttggaa
acagaagttgcgcgtaagattgaaaaccaggtggcgactttagatggtattgaacatatt
cgtaccacgctgacgaatggtagcgcttcaacgcgggtagaatttaatatcgacaaggat
gtggatgttgccttaaatgaagtgcgtaatgcggttgatagtattaaagcagatttgcct
gcaagtatgacctcaccaacggtttctaaagtgaccacggcgggtagcgcaatattaacc
tttacggtcgatgcgccttccatgacagaagaagcagtgtcgtggatgattgataatgat
gtctccaaagcgttactagccgtcaaaggggtgggcaaggtttcacgtattgggggtgtg
acgcgggaagtacatgtcgatcttgatcccattaaaatgcaagccttgggtgtaacggcg
gcggatatttccaatcaattaaagctagtgcagcaagattcctcgggtgggcgctcggat
attggtggcaatattcagtcgattcgtactttagccgctgcccaagatacccaagatatt
gaagccctaaccattccgttaggtgatgggcgtaccgtgcgtttaagcgatattgcgcaa
gtcaaagatacggtagccgaacgtactaattacgcgttattagacggtaaaaaggtggtc
ggctttgaaattatgcgtagtaagggggcgagtgcggtcgccgtggctgataaggtgcgt
cataccgtagctaactttcaagcacaacacccttatttaaagataacagaagcggcagat
acggttgaacctattacggataattttaaaggttcaatggagttactgtatgaaggcgca
tttttagccattattgtggtgtatttattcttgcgtgattggcgtgcaacgttagtgtcg
gcggtcgctttgccactttcgattattcccacctttttggttatgcaatatttgggttat
agcttaaataccttaacgctgttggcattagccttggtggtggggattttggtggacgat
gccattgtcgaaattgaaaatattgtgcggcatttgcaaatgggtaaaaccccgtatgaa
gcggcaatggaagcagcggatgaaatcggtttagcggtaattgccacgacattttccttg
attgccgtatttctaccaaccgcgtttatgccgggcgtaccgggtaagttttttgaacaa
tttggtattaccgcttcagtttcggtgtttgcgtccttaatggtggcgcgtttgctaaca
ccaatgatggctgcgtatttcttaaagccacacgctgaagaaaaacacggtgatagtccg
gtgaaagcggcttatctacgcttagtgaactggtgtttacatcatcgcatcattacgatg
gttttaaccctagcattctttattggctcggtcatgctagtgcctatgttgcctaaaggt
tttgtgcctgtggccgatagcggacgtaccagcgttaaagttgagctgcaacccggttca
accttagaagaaacctatagtgcggcggaacaagcccgcaaaattattagccaagtggat
ggcgtcattcaggtgttctctaatgtaggcacggggggcggtacaggtggacccatgggg
caaagtggcacggctgatgtacgtaaagccaccttaaccgtgaaactcattcatcgcaat
gaacgtaagcgtaagcaaacggcgattgaagcggaaatgcgccaacgtctacaagtattg
ccgggggcgcgtgtttcggttggtgtcggtggttcgggcgagattttacaagtaacttta
gccggtgaaaatgcagtattactgcaagaagccagccaagccgttgaacgtgatttacgt
accttaaaaggtattggtaacattaaatcctctgccagtttacaacgcccagaattacac
attattccagactatgtgaaagccggggatttaggcattacggcgggggcattatccaac
gctatgcgcttagcgacctctggtgattttgctaccagtttgcccaaattgaatttagac
gaacgtcaggtcaatattcgggtacagcttgatccggcttggcgtaccaaccttgattta
attcgtaatttgggggtgaaaagtattcgcggtgaagtgccattagccacggtagccagt
attaaaatgggcagtggtcccgcacaaattgaccgtttagatcgtaaacgcaatattacc
tttgaggtcgaattaggctcgcggattattggcgatgtgcaagcggaagtggctaaattg
ccttccttacaaaatctacccgcaggcgttactcaaccaaaatccggtgaagctgagcgt
atggcggagttattctcaagctttggcaacgccatgctagtcggcgtgttattgatttac
atcgtattagtgttgttattccacgatttcttgcaacccctaacgattttagcggcatta
ccgttatcgtttggtggggcatttgtcgccttattgataacgcataatagtttttccatg
cctagcgttatcggtattttaatgttgatggggattgcggcgaagaactcgattctgtta
gtggattacgcggtcatggcttacaaagaacacggtatgccgttatacgatgcggtattg
gatgcctgtcgtaaacgggcgcaacctatcattatgacaacgattgcaatgggtgcgggt
atgttgccggtggctttaggtttaggcgctgaacctagcttccgttcgccaatggcaatt
gtagtaattggtggcttattaacctcaactttattaagtttgttggttattcccgtaatt
tttacttatgtagatgattttgaaaaactcctgaaaaaaatactgcggtattttagacgg
cattcggatcatcaaacggtaaaattatctgcttga
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