Candidatus Thiocaldithrix dubininis: QJT80_09740
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Entry
QJT80_09740 CDS
T09759
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu01501
beta-Lactam resistance
tdu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QJT80_09740
01503 Cationic antimicrobial peptide (CAMP) resistance
QJT80_09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdu03036
]
QJT80_09740
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_09740
01504 Antimicrobial resistance genes [BR:
tdu01504
]
QJT80_09740
Chromosome and associated proteins [BR:
tdu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QJT80_09740
Transporters [BR:
tdu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QJT80_09740
Antimicrobial resistance genes [BR:
tdu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QJT80_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
Beta-barrel_RND_2
CzcB_C
HH_YBHG
HH_EMRA
HH_MFP_RND
BSH_CusB
BSH_RND
BSH_CzcB
Biotin_lipoyl
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
WGZ89782
UniProt:
A0AA95H1X4
LinkDB
All DBs
Position
complement(2087944..2089137)
Genome browser
AA seq
397 aa
AA seq
DB search
MNNKRSKSIIPKLIIALLVIAGIAAALYFSGVIKPKTTVKSPFVSTATTLTAEKAALTVT
TITPQIEKWDTQISATGALAPWQEAIVSSEIGGVRVTELLVDIGSYVKQGQVLARLSKDA
ILADIAQSQAAIAQAKANLADAKNNVARADRLKASGALPMQQIEQMYTSAAVAEANLNAA
QAGLESQQIRLKHTTITAVDSGIITSRTATLGAVVQTGSEMFRLLRQGRVEWLADVPAQY
LSSLQVGQSATVLLPTGATVNGTIRKIAPSLNSNTRTNTVYVALPTDSPARPGMFAQGQI
QIGEAQALTIPQSALVLRDGNSYVFEVGDNNIVQQRLVKTGRRQDDRVEIMDGIQPSAKL
VATGGAFLNEGDKVQLASANPTPPASVTTTTTIEAKP
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaataataagcgatctaaatccataatacctaaactcataattgcgttgctggtgata
gcgggcattgctgcggcattgtatttttcaggcgtaattaagccaaagaccactgttaaa
tcgccttttgttagtacggctaccacactaaccgctgaaaaagcggcattaaccgtaacc
actattacgccacaaattgagaaatgggatacccaaatttctgcgacgggtgcattagcg
ccttggcaagaagccattgtgtcttcggaaattgggggcgtgcgggtaacagaactttta
gtagatatcggcagttatgtaaaacaagggcaggtgttagcgcgtttgtctaaggatgct
atcttagcggatattgcgcaaagccaagccgctattgcgcaagccaaggcgaatttagcc
gatgctaaaaacaatgtggcacgggcagaccgtttaaaagccagcggtgcattgcccatg
cagcaaatcgaacaaatgtataccagcgcggcggtggctgaagcaaatttaaatgcagca
caagcgggcttggaaagtcagcaaatccgcttaaaacataccactattaccgctgtcgat
tccggcattattaccagtcgtactgcaacgttaggcgcggtggtgcaaacaggttcagag
atgttccgcttattgcggcaaggtcgggtggaatggttagcggatgtaccggcgcaatat
ttatcgagtttgcaagtggggcagagtgccactgtgctgttgccaacgggcgcgacggtg
aatggcacaatccgcaaaattgcgccgtcactgaatagtaatacgcggactaatactgtg
tatgtggcattacctaccgatagccccgcacgccccggtatgtttgcgcaagggcagatc
caaattggtgaagcgcaagctttaacgattcctcaatcggcgttagtgctgcgggatggc
aatagttatgtgtttgaagtgggtgataataatattgtgcaacagcgtcttgtgaaaacc
ggacggcggcaagatgatcgtgtcgaaattatggacggcattcaacctagcgctaaatta
gttgctaccggcggtgcattcttaaatgaaggcgataaagtgcaattagctagcgcgaac
ccaactccacctgcttcggtaacgacgaccacgacgattgaggctaagccttaa
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