Candidatus Thiocaldithrix dubininis: QJT80_11605
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Entry
QJT80_11605 CDS
T09759
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tdu
Candidatus Thiocaldithrix dubininis
Pathway
tdu01501
beta-Lactam resistance
tdu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QJT80_11605
01503 Cationic antimicrobial peptide (CAMP) resistance
QJT80_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdu03036
]
QJT80_11605
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdu02000
]
QJT80_11605
01504 Antimicrobial resistance genes [BR:
tdu01504
]
QJT80_11605
Chromosome and associated proteins [BR:
tdu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QJT80_11605
Transporters [BR:
tdu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QJT80_11605
Antimicrobial resistance genes [BR:
tdu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QJT80_11605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
EELM2
Motif
Other DBs
NCBI-ProteinID:
WGZ90139
UniProt:
A0AA95H8C0
LinkDB
All DBs
Position
complement(2488880..2490001)
Genome browser
AA seq
373 aa
AA seq
DB search
MKPITPWVLIVGFLWGTASYAAENSAVNAALPSMKVQVSNAPDFYYLDGHVEAVNQSTLS
AQTSGTIEKLYYDVDDYVEKGSVIARIKSKNQQAGVQQARAGQAEAAASYAEAKARLAEA
EAAYKRISDIYARRLVPRADYDNAEAGLKAAQAQVRAAEARTVAASAQATQAGEQLGYTT
LIAPYAGIVTKRFVQLGEAVNPGTPIMSGISLDQLRVVVEVPQRMINAVRKEQKAFVFQD
GTSKSLPVKDLTFFPYADPTTNAFKVWVGLDEGVKNLFPGMFVKTAFITGTQADVIAVPE
SAIAIRSEVMGVYVLDDKGQPALRQIRLGRKLNDKDVMVLAGLDAGETIALDPVQAAIYL
KQSTPSTEGKPHE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatcactccgtgggtgctaatcgtcggatttttgtggggtacggcgagttat
gctgctgaaaattcggcagttaatgcagctttgcccagtatgaaagtacaagtcagtaat
gctcccgacttctattatttagacggtcatgtggaagcggtcaatcaaagtactttatcc
gctcagaccagcggtactatagaaaaattgtattacgacgtggatgactatgtagaaaaa
ggcagcgtcatcgcacgtattaagtcaaaaaatcaacaagcgggcgtgcaacaagccaga
gcgggacaagcagaagccgctgccagttatgcggaagctaaagcgcgtttagccgaagcc
gaagccgcgtataaacgcattagcgatatttacgcccgccgtttagtgccacgcgccgat
tatgataatgccgaggcgggtttaaaagccgcgcaagcgcaggtgcgggctgctgaagcg
cgtaccgtcgccgccagtgcgcaagccacccaagcgggtgagcaattaggttataccact
ttgattgcaccttatgcaggtatcgtgactaaacgctttgtgcaattaggcgaagcggtt
aatccgggcacaccgatcatgagcggaatttcactggatcaattgcgggtcgtggtggaa
gtgccgcaacgtatgattaatgccgtgcgtaaagaacaaaaagcctttgtgtttcaggat
ggcactagcaaatccttacctgttaaagatttaactttcttcccttatgcagaccctaca
acgaatgcgtttaaagtttgggtcggtttagacgaaggcgtgaaaaatttatttcccggc
atgtttgttaaaacggcgtttattacaggcacacaagcggatgtgattgctgttccggag
tctgctattgccatacgcagtgaagtgatgggggtgtatgtattggatgataaagggcag
cctgctttacgccagattcgcttaggtcgtaagttaaatgacaaagatgtaatggtctta
gcgggcttagatgcgggtgaaaccattgccttagatccggtacaagcagccatttattta
aagcaaagcacgccaagcactgagggtaaaccgcatgagtaa
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