Triplophysa dalaica: 130417572
Help
Entry
130417572 CDS
T09616
Symbol
ptprfb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
tdw04520
Adherens junction
tdw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130417572 (ptprfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130417572 (ptprfb)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130417572 (ptprfb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130417572 (ptprfb)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130417572 (ptprfb)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130417572 (ptprfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
Fn3_VIN3
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Ig_C17orf99
Fn3_ELFN
TMEM154
ICAM_N
Motif
Other DBs
NCBI-GeneID:
130417572
NCBI-ProteinID:
XP_056599182
LinkDB
All DBs
Position
3:12424921..12575282
Genome browser
AA seq
1916 aa
AA seq
DB search
MVLNICPSLPVLPNGLLLLLLLSCVQLSSQSDSMPHFIKSPEDQTGISGGVASFVCQAAG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSLGEINT
SAKLTVLEENQIPAGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDIS
SSNGRIKQLRSGGSPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPP
RFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMEGEVELTKDEEMPVGRNVLELTNIRQ
SANYTCVAISSLGMIDATAQVSVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYII
QYRAKAPDTSFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQA
PSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYTSDLDAPLSAWQKHNTYDSRL
TTISGLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTRILLTW
LWPVQDPIIKYELQYWEADSNNKIHVTFDPAGSYAVEGLKPDTLYKFSLAARSEMGLGVF
TQPIEARTAQSTPSAPPQDVNLLSLSSTSIKVSWVPPPAASRHGAIVRYTVSYQAVNGED
SERHEVTDIGADASSYVLEGLEKWTEYQVWVRAHTDVGPGPESTAMRIRTNEDVPGAPPR
KIEVEAVNSTAIRVTWKPPLSGKQHGQIRGYQVIYSRLENGEPRGQPNIMDLSLSEAQWK
IEESTEYEAFITGLFSETSYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMIISTTIG
NTALIQWQSPKDMVGELIGYRLRYKRLEEETYEVREFARLDDHYTATDLHKGATYSFQLS
ARNRAGAGEEYVKEIITPEDVPSGFPLNLRVVGLTTSTTRLSWEPPALSERNGRITQYKV
FYHDINIKQNSTVNTNDTQMTIQGLQPDTTYDIRVQAFTSKGAGRISPSIQSRTMSTSPA
FATSFGVKAVMKTSVLLTWEVPENYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDY
SFVLMSRGNTAGGLQQQVSIRTAPDLFKSKPVLYKPDQTSTGKITVNLPKVPTTAPVRWY
YIVVVPVSLTSSRKWSNPDEMELDELLESSEGALLRRRRHTDNVRPYITAKLDYLPDTFT
LGDEKTYNGFFNRPVPNNQHYLCFVMAELKDQYPVIANEKQRIFSASPYSDPIMVSMNSS
ELARTMEQPEMLWVMGPVLAVVVIIIIVIAILLFKRKRASPLPKDDHSSGVKDCLLANSS
DPVEMRRLNYQTPGMREHPPITVCDLADHIERLKANDALRFSQEYESVDPGQQFTWENSN
LEVNKPKNRYANVIAYDHSRVVLTPVDGVPGSDYINSNYIDGYRKQNAYIATQGPLPETL
SDFWRMVWEQRASTIVMMTRLEEKSRVKCDQYWPVRGTETYGMIQVTMLDAVELATYSVR
TFALYKNGSSEKREIRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPADAGPMVVHCSAG
VGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCG
NTEVPARNLYAHIQKLTQPPSGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLV
NIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWRMLWEHN
STIVVMLTKLREMGREKCHQYWPSERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQ
SRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFIT
LSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttaatatttgcccatcattgcccgtcctgcccaatgggctgctgcttctgcta
ctgctgagctgtgtacaactctcctctcagtcagacagtatgccacattttatcaagtct
ccagaggaccagacagggatttcaggaggagtggcatcttttgtgtgccaagcagcgggt
gagcccaagcctcggatcacatggatgaagaaaggaaagaaagttagctcccagcgtttc
gaggtgattgaatttgatgatggctcagggtctgttctccgcatccagccgcttcggacg
cacagggacgaggccatctatgagtgcacagccaccaacagcctaggagaaatcaacacc
agtgctaaactaaccgtgctggaggaaaaccagattcctgccggctttcccaccatagac
atgggtcctcagctgaaggtggtcgagcgcacaagaaccgccaccatgctgtgtgccgcc
agtggcaaccctgacccggagatcacctggtttaaggacttcctgcctgtagacatcagc
agcagcaacgggcgaattaagcagcttcgttcagggggttcaccgatacgaggagctctg
cagattgaaaacagtgaagaatcagaccaggggaaatatgaatgtgtggcaacgaacagc
gccgggacgcgctactctgcccccgccaatctctacgtgcgagtacgacgagtaccaccc
cgtttttccataccgcccactaatcatgaggtcatgccagggggcagcgttaacctcacc
tgtgtggcggtcggggcccccatgccctacgtcaaatggatggagggtgaggttgagctt
accaaggatgaggagatgcccgttggacgcaatgtgctggagctcaccaacatccgtcag
tctgccaactacacttgcgtggccatctcatctcttggtatgatcgatgcaactgcacaa
gtctctgtcaaagctctaccgaagccccctacgtccttaattgtgacggagacgacagct
acaagtgttactctgacatgggactctggaaaccccgagcctgtgtcttactacattatt
cagtaccgggccaaggccccagacaccagcttccaggaggtggatggtgtggccaccacg
cggtacagcatcggtggactcagcccgtattctgagtatgagttccgcgtcatggccgtc
aacaacattggtcgcggaccacccagcgaccccgtcgagacccggacgggagagcaggcg
ccctcttcacctccactccacgtccaagcccgaatgctcagtgctagcaccatgttggtg
cagtgggaacctccagaggaacctaacggtcaaatcagaggctaccgcgtctactacacg
tcggatctagacgcccctctcagtgcttggcagaagcacaacacgtacgacagccgtctc
accaccatatcaggcctgactacagatattacgtacagcctgcgtgtactggggttcacc
tctgtaggggacggacccccatctgatgtgttgcaggtcaagacacagcaaggagtcccc
gctcaaccatccagctttgaagctgaagctgaacttgatacacggatcctgcttacttgg
ctgtggcccgttcaggaccccatcattaaatatgagctgcagtattgggaggccgactcg
aataacaagatccacgtcaccttcgaccccgccgggtcttacgccgtcgaaggattgaag
ccggacaccctgtataaattctctctggcggctcgctctgaaatggggctgggggtgttc
actcagcctattgaagccaggaccgcacagtccaccccatccgccccccctcaagatgtg
aatttgctcagtctgagctccaccagcatcaaggtgagttgggtgcctccaccagcagct
agccgccacggcgcaatagtgcgctacacagtcagctaccaggcagtgaacggtgaagac
agcgagcgtcacgaggtgaccgacatcggagcggatgcctccagctatgtgctggaggga
ctggagaagtggacagagtatcaggtgtgggtgagagcccacaccgatgtgggccccggc
ccagagagcacagccatgcgtatccgtaccaacgaggacgtgccgggagccccacctcgc
aaaatagaagtggaagctgtgaactccacggctattcgcgtgacatggaagccgcctctt
tctggaaagcaacatggccagatccgtggataccaggtcatctactcccgcctggagaac
ggggagccacgtgggcaaccaaacatcatggatttatctctttcagaggcacagtggaaa
attgaggagtccacggaatatgaggccttcatcactggacttttctctgagacctcttac
tctgtaaccgtggcagcttatacgaccaagggtgacggagcccgcagcaaagctaaagtc
atcactactactggtgcagtgcctggaaaacccaccatgatcatcagcacaaccattggc
aacacagctctgatccagtggcagtctcccaaagacatggttggtgaacttattggctac
cgtctgagatacaagcgtctagaggaagagacctacgaggtccgcgagttcgcccgttta
gatgaccactacaccgccactgacctgcataagggcgccacgtacagctttcagcttagt
gccaggaaccgggcaggagccggagaggagtatgtaaaagagatcatcactccagaggat
gtgcccagtgggttcccactcaacctgcgtgtagtgggcctaaccacatccaccacccgg
ttgtcctgggaaccccctgccctgtctgagcgaaatggccgtatcacgcaatacaaagta
ttctaccatgatatcaacattaagcagaacagcacagtcaacacaaatgacacccagatg
accattcaaggacttcaaccggacaccacctatgatatccgcgtccaagccttcacaagc
aagggagctggtcgcataagcccaagtatacagagcaggaccatgtctacatcacccgca
tttgctacaagttttggtgtcaaagctgtcatgaaaacttctgtccttctaacctgggag
gtaccagaaaactacaaatctcaagtgccttttaagatcctctataaccagcagagcgtg
gaggttcagggcaacctgaagaggaagctgatcacgcgtctgcagccggatacagattac
tccttcgtgctgatgagcagaggaaacactgccggaggtctgcagcagcaggtgtccatc
cgcacagccccagacctgttcaaatccaaaccagtcctttacaaaccagatcagaccagc
accggaaaaatcacagttaacctgcccaaagtgcccaccacggcacctgtcagatggtac
tacatcgtggtcgtaccagtgtctcttacatcttcacgtaaatggtctaatcctgatgag
atggaacttgatgagcttctggagtctagtgagggagcccttctcaggagacgacgtcac
acagacaacgtcaggccgtacatcaccgcaaaactggattatctcccagataccttcacc
ctgggtgatgaaaagacttacaatggcttcttcaatcggccggttcctaataaccagcat
tacctgtgctttgtcatggctgaactcaaggatcagtaccctgtcatcgccaatgagaaa
cagcggatcttctcagccagcccatactctgatcccatcatggtgtccatgaatagcagc
gagctggcacgcaccatggagcagcccgagatgctttgggtcatgggccctgtgcttgcc
gtggtggtcatcatcatcatagtcatcgccatcctgctctttaagaggaaaagggcatca
cccctacccaaagatgatcattctagtggtgtgaaggactgtctgctggccaactcatcc
gatcctgtcgaaatgaggagactcaactaccagacgccaggaatgagggaacacccaccc
attacagtttgtgaccttgcggaccatattgagagactcaaggccaatgacgccctccgc
ttctctcaggagtatgagtccgttgatcccggacaacagttcacttgggagaactccaac
ttggaggtcaacaagccaaagaaccgttatgccaacgttattgcttacgaccactcgagg
gtcgttcttacccccgtggacggtgttccaggtagcgactacatcaattccaactacatt
gacggctaccgtaagcagaatgcctacatcgccacacaagggcccttgcccgagactctg
agtgacttctggaggatggtgtgggaacaaagggccagtactatagtcatgatgacaaga
ctggaagagaaatccagggtgaagtgtgaccagtactggccggtccgtggcactgagaca
tacggaatgatccaagtaaccatgcttgatgctgtggaattggcaacctacagcgtgcga
accttcgccctttacaagaatggctccagcgagaaaagagagatcaggcagttccagttc
atggcctggccggaccacggagtgcctgaataccccacccccatcctagccttcctgcgt
agggtcaaggcctgcaaccccgctgatgctggaccgatggtagtgcactgcagcgccgga
gtgggccgcaccggatgcttcatagtcatcgatgccatgctggaacgcatgaagcacgag
aagacggtggatatctacggtcacgtcacatgcatgagagctcagaggaactacatggta
cagaccgaggaccagtacatcttcatccacgaggccttgctggaggccgccacctgcggg
aacactgaggtcccggcccggaacctttacgcccacattcagaagctcacccagccaccg
tccggagagacagtcacagccatggagctcgagtttaagaggctcgccaactccaaagcc
cacacgtcacgattcatcagcgccaacctgccctgcaacaaattcaaaaaccggctggtc
aatatcatgccctttgagtcgacacgtgtgtgcctgcagccaatcagaggagtggaaggc
tcggactacatcaatgccagctgcatcgatggatacagacaacagaaggcttatattgcc
acccagggccctctggcagagaccactgaagacttctggaggatgttatgggagcacaat
tccactattgttgtgatgctgaccaaactcagagaaatgggacgggagaagtgtcatcaa
tactggccttctgagcgctctgcccgctatcagtattttgtggtggatcccatggctgaa
tacaacatgccccagtacatactgagagagttcaaagtcacagatgccagggatggccag
tccagaaccattcgtcagttccagttcactgattggccagagcagggagtgccaaaaact
ggggaaggattcattgatttcattggacaagttcataaaactaaggagcaatttgggcag
gacggaccaatcactgtgcactgcagtgctggagtgggaaggacaggtgttttcatcact
ctcagtatagtcctggagaggatgagatatgagggtgtggtggatctgttccagacggtt
aagactctgcgcacacaacggcctgccatggtgcagacagaggatcagtaccagctgtgc
tacagagcagctttggagtacctggggagctttgatcactatgcaacgtaa
DBGET
integrated database retrieval system
