Triplophysa dalaica: 130418222
Help
Entry
130418222 CDS
T09616
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
tdw
Triplophysa dalaica
Pathway
tdw04217
Necroptosis
tdw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130418222 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130418222 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130418222 (sharpin)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
130418222 (sharpin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
Ubiquitin_2
PH
Motif
Other DBs
NCBI-GeneID:
130418222
NCBI-ProteinID:
XP_056600214
LinkDB
All DBs
Position
3:complement(26971479..26984385)
Genome browser
AA seq
404 aa
AA seq
DB search
MSVSSGCSTVLMSVRVSVRPLRVGSDSLRLQLSMNASRAGHFTLTLRHTDRGGRSVSLAE
FDLRSVKYEVTSARCHELRLSKPPHDSLTFTFRSEQEAQEWATVMMSSLREAHRVANISH
LSHDGLQYVKCEDKSSTFSMSTKEELCIELSQAIEAGDTRAAMRYASDLAQHQIALTIQP
SQRDAEEGEISLAVVVEDTTSSCCVTVKILPHMTVSSMKQQMFLEYGFHPKVQRWVIGQC
LCTDVRSLASYGICRDGDTAFLYLLSARHACLSQQQCQQEQENAALMLTPAPNPTPALTT
ASSSSSPASHDWRGYSTLPPRFTHSSSGGTGTEKPNVNDIINLDILQLGGSKLKSSNTQL
GWSCPSCTFINKSTRPGCEICSTDRPNPPNHCSIHQEKVRRSDK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagctcgggctgcagtacggtcctgatgtcggtgcgcgtgtccgttcggccg
ctacgcgtgggctccgactctctgcggctgcagctcagcatgaacgcgagccgcgcggga
cacttcacgctcacgctcagacacaccgaccgtggaggacgcagcgtgtctctagcagaa
tttgatctgcgctcggtgaagtatgaggtcacatcggctcgatgtcatgaactgcgtctc
agcaaaccaccccacgacagcctcacatttaccttccgcagcgagcaggaggctcaggag
tgggccactgtcatgatgtcttcactgcgagaggcacacagagttgccaacatttcacat
ctctcacatgatggactgcagtatgtgaagtgtgaagacaaaagctctaccttttcaatg
tcaactaaagaggagttgtgtatagagctatcccaagcaatagaggctggtgatactcgt
gcagcgatgcggtacgcctcagatctggctcagcatcaaatagcactgactatccagcca
tcgcagagggatgcggaggaaggcgagataagtttagctgttgtagtagaggatacaacg
tcatcttgttgtgtcactgttaaaatccttccccatatgactgtttcctctatgaagcag
cagatgtttcttgagtatggctttcaccccaaggtgcagcgctgggtgatcggacagtgt
ctgtgtactgacgtccgttccttagcgtcgtatggcatctgtagagatggtgacacagca
ttcctctaccttctgtctgcccgtcacgcctgtctcagtcaacagcagtgccagcaggag
caagagaacgccgccctaatgttgacaccggcaccaaaccccacacctgccctcacgaca
gccagcagcagcagcagccctgctagccatgactggagaggatacagcacgctacctcct
cgatttactcacagcagctcaggtggtactggcacagagaaacctaacgtcaatgacatc
attaaccttgatattttgcaactcggagggtccaaactgaaatccagtaacacacagttg
gggtggtcctgcccttcctgtacattcataaataaatccacaagaccaggctgtgaaatc
tgtagcacagatcgacccaaccctccaaatcactgtagcattcaccaggaaaaagtaaga
agatctgacaagtga
DBGET
integrated database retrieval system
