Triplophysa dalaica: 130418278
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Entry
130418278 CDS
T09616
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130418278 (dhx9)
03012 Translation factors [BR:
tdw03012
]
130418278 (dhx9)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130418278 (dhx9)
5.6.2.6 RNA 3'-5' helicase
130418278 (dhx9)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130418278 (dhx9)
Translation factors [BR:
tdw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130418278 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
130418278
NCBI-ProteinID:
XP_056600309
LinkDB
All DBs
Position
3:complement(4556378..4567842)
Genome browser
AA seq
1322 aa
AA seq
DB search
MADIKNFLYVWCGKKKMTPNYDIRAAGNKNRQKFMCEVRVEGYSYIGMGNSTSKKDAQTN
AARDFVNYLVRTKEIHPSEVPSLGVSVPDGGNGGQEDGGFGNLPSSCPLPPHLAVKVEAG
QTNDPQGSAPVPGVTGLGYSGFNNAQWERGANLQQYYSKKEEQDDKATFESEEVDLNAGL
HGNWTLDNAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMTIFVRQLGRKVIAREHG
STKKLAAQSCALSLVRQLYHLGVIEAYTGQTKKKDGETVDVYEVNLGDDLPNQLMRVVQE
LGIQIPPPPQDPNTPVSLIQGKLAQFEPSQRQNTEGVVPWSPPQINWNPWTSSNIDEGPL
AFCTPEQINMDLLNELNYQLEQDKNLQTILSERSQLPVKNFEKEIMSAIHNNPVVIIRGA
TGCGKTTQVPQYILDEFIHSGNASDCNIVVTQPRRISAVSVSERVSFERAEEVGKSCGYS
VRFESMLPRPHASILFCTVGVLLRKLESGIRGISHVIVDEIHERDLNSDFLLVVLRDVIQ
TYPDVRIILMSATIDTTMFREYFFNCPVIEVHGRAHAVQEYFLEDCIQMTQFIPPPMDRK
RKDKDEDGGVDEEVNCNVICGPEYSPETKRAMAQLNEKETPFELIEALLKYIETLKVAGA
VLVFLPGWNLIYSMQKHLEMSPHFGSRQYRILPLHSQIPREEQRRVFEPVPDDVTKVILS
TNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGF
CFHLCSKARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGQFLSKAIEPPPLDAVIEA
EHTLRELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCILNVGDAACTISAASCFPEP
FINEGKRLGFVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEDAEIRFCEHKRLNMPTLRM
TWEAKVQLKDILVNEGFPEECLMNQIFNNVGPDNNLDVVISLLTFGSYPNVCYHKEKRKI
LTTEGRNALIHKSSVNCPFTSQDMKYPSPFFVFGEKIRTRAISAKGMTLVSPLQLILFGS
KKITSNGDIVELDEWIKLRIHHDVAAGVVALRAAFEALVVEVTKDPEYIRKLDPTNEHLL
NVMRLVSRPSSAGINLMANNPRFGDGPRPPKMARMDFGGGGGYGGRGGGYRGGGGGGGGG
NWSGGGYRGGGGYQAGRGGGGYQGGRGGGGYQGGREVEATRVEEKVEATRVEEKVEATRV
EEEATRVAGAAIEGQEGIVAGVDTGEVEGMEEVEGSEVAGVVTGVVIEVAFKAGCLSMSP
WM
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaaaaactttctgtatgtctggtgtgggaaaaagaagatgacgccaaac
tatgacatccgagcagctggaaataaaaacaggcaaaagttcatgtgtgaggtgcgtgtt
gagggatacagttatatcggcatgggaaactccaccagcaagaaggatgctcagaccaat
gctgcgagagattttgtcaattatcttgtccggacgaaagagatacatcccagcgaagtt
ccctctttgggggtcagtgtacctgatggaggaaatggaggacaagaagatggtgggttt
ggaaatcttccgtccagttgtccactgcctccacatctagctgtgaaggttgaagccggt
caaacgaatgatcctcagggctctgcacccgtcccaggggtcacaggtttgggatactcc
ggcttcaacaatgcccaatgggagcgaggagcaaacctgcagcagtattactcaaaaaag
gaagaacaggacgacaaagcgacctttgaatcggaagaggtcgatctgaatgccggcctt
catgggaactggacgctggataatgcaaaggcccgtctgaaccagttttttcagaaagag
aaaaaccaaaccgactacaagtatagccaagtgggacctgatcacaacaggagttttatt
gccgagatgacaatctttgtaagacaactcggaagaaaggttattgctcgtgaacacggc
tccaccaagaaactggctgcccagtcatgtgcgctgtctctggtccgtcagctgtaccat
ttaggagtcattgaagcatacacagggcagaccaagaaaaaagatggagaaactgtggac
gtatacgaagtaaaccttggcgacgatctgccaaatcagcttatgagggttgtgcaggaa
cttggaatccaaatccctccgcctccgcaggatcccaacactccggtgtctctgattcaa
gggaagttagcacaatttgagccatcacagaggcagaacactgaaggcgtggtgccgtgg
tctcccccgcagatcaactggaacccctggaccagcagcaacattgatgaagggccgctg
gcattttgcacaccagaacagatcaacatggacctgctgaatgaactcaactatcaactg
gagcaggacaagaatctgcagacgattctaagtgaaagaagtcagctgcctgtcaagaac
tttgagaaagaaatcatgtctgccattcacaataacccggttgtcatcatccgtggagcc
accgggtgcggaaagaccacccaagtccctcagtacatactggatgagttcatccacagt
gggaatgcatctgactgtaatatcgtcgtaactcagccgagacgcatcagcgccgtgtcc
gtgtcggaacgtgtgtcctttgaaagagcagaagaggtggggaaaagctgtgggtacagc
gtgcgtttcgagtctatgcttcccagacctcacgccagcattctcttctgcactgtcggc
gtgttgctaaggaagctggaatctggtatccgtggcatcagtcatgtgattgtggatgaa
atccatgagagggacctgaattcggatttcttattggtggtgttaagagatgtgatccag
acctaccctgatgtgcgcatcatcctgatgtccgccaccattgacaccaccatgtttagg
gagtatttctttaactgtcctgtcattgaggtgcatggacgtgcacatgctgtacaagag
tattttctggaggactgcattcagatgacccagtttataccgccaccgatggataggaag
aggaaagataaagacgaggatggaggagtagacgaggaggtcaactgtaatgttatctgt
ggacctgaatattctcctgaaactaagcgggctatggctcagctaaacgagaaggaaact
ccctttgagctgatcgaggctttgctgaagtacatcgaaacgttgaaagtagccggggct
gttctggtcttccttccaggctggaatctcatctattccatgcagaaacatctggagatg
agcccacacttcggtagtcgtcagtacagaatccttccccttcactctcaaatcccaaga
gaggaacagaggagagtgttcgagcctgttcctgatgatgtcactaaggtcattttgtcc
accaacatcgcggagaccagcatcaccatcaacgatgtagtctatgtcattgactcctgc
aagcaaaaagtaaagttgttcacctctcataacaacatgacaaactacgccaccgtatgg
gcctccaagactaacctcgagcagaggaagggacgtgccgggagagtcagacctggcttc
tgttttcacctgtgcagcaaagctcgcttcgaaaagctagagacccacatgactccagag
atcttccgcactccactgcatgaggtggccctgagcattaaactgctgagactgggagcc
atcggccaattcctgtccaaagccatcgagcctcctcccttggatgctgttattgaagcc
gaacacacactcagagagctggatgctctggacaccaatgatgagctgactccactggga
cgcattctagccaaactgcccattgaacctcgtctgggaaagatgatgattatgggatgc
atcttaaatgttggagatgctgcatgcaccatctctgcagcaagttgtttccccgagcca
ttcatcaacgagggaaaacgtctcggatttgttcatagaaacttcgctggcacacgtttc
tctgaccacgtggccttactttctgttttccaggcctgggatgaagtcaggatggggggt
gaggacgcagagatccgattttgtgaacacaagaggctgaacatgcctacgttgagaatg
acatgggaggccaaagttcagctgaaagatatccttgttaatgagggcttccctgaagag
tgcctcatgaatcaaatttttaacaacgtgggaccggacaataacttggatgtggtcatc
tctctcctaacctttggctcataccccaacgtgtgttaccacaaagagaaaaggaagatc
ttgactactgagggacgaaatgccctcattcacaaatcctccgtcaactgtcctttcacc
agccaggacatgaaatacccatctcctttcttcgtctttggggaaaagatccgaacccga
gctatctctgctaaaggaatgactcttgtcagccctctccagctcattctgttcggctcg
aagaagatcacatccaatggagatattgttgagcttgatgagtggatcaagttgaggatt
caccatgatgtagcggctggggtggtggcgctgagggcagcttttgaagccctggttgtg
gaggtgaccaaagacccggaatacatccgaaaattggatcctaccaatgagcatttgctg
aatgtcatgaggcttgtgtctagaccctcttcagcgggtataaacctcatggccaataac
ccacgctttggagatggtccacgaccacccaagatggctcgtatggattttggaggcggt
ggaggctacgggggccgtggaggaggatacagaggaggaggtggtggtggtggtggtgga
aactggtctgggggaggatacagagggggtggaggatatcaagctggaagaggaggtgga
ggatatcagggtggaagaggaggtggaggatatcagggtggaagagaggtggaggctacc
agggtggaagagaaggtggaggctaccagggtggaagagaaggtggaggctaccagggtg
gaagaggaggctaccagggtggcgggggcggctatagagggtcaggagggtatcgtggcg
ggggtggatacgggggaggtggagggtatggaggaggtggagggttcagaggtggccggg
gtggtaacaggggtggttatagaggtggcgtttaaagctggctgtctgagcatgagtcca
tggatgtaa
DBGET
integrated database retrieval system
